>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.

Probab=90.07  E-value=0.24  Score=26.68  Aligned_cols=29  Identities=34%  Similarity=0.390  Sum_probs=23.9

Q ss_pred             CCCEEEEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf             43379999707886257899999997233
Q gi|254781225|r  499 KAQRFIHIRGVGGSGKSTLMNLIKYAFGN  527 (789)
Q Consensus       499 ~~~~~~~~~G~G~nGKSt~~~~l~~llG~  527 (789)
T Consensus        24 ~~Ge~~~ivGpSG~GKSTllr~i~Gl~~p   52 (178)
T cd03229          24 EAGEIVALLGPSGSGKSTLLRCIAGLEEP   52 (178)
T ss_pred             CCCCEEEEECCCCCHHHHHHHHHHCCCCC
T ss_conf             89989999999998399999999859999