>cd03237 ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity of more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.

Probab=91.32  E-value=0.17  Score=27.63  Aligned_cols=33  Identities=24%  Similarity=0.412  Sum_probs=25.6

Q ss_pred             CCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf             987433799997078862578999999972330
Q gi|254781225|r  496 GGNKAQRFIHIRGVGGSGKSTLMNLIKYAFGNQ  528 (789)
Q Consensus       496 g~~~~~~~~~~~G~G~nGKSt~~~~l~~llG~~  528 (789)
T Consensus        20 Gti~~GEiv~liGpNGaGKSTLlk~l~Gll~p~   52 (246)
T cd03237          20 GSISESEVIGILGPNGIGKTTFIKMLAGVLKPD   52 (246)
T ss_pred             CCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCC
T ss_conf             846579899999799976999999997787888