HHsearch alignment for GI: 254781225 and conserved domain: pfam00437
>pfam00437 GSPII_E Type II/IV secretion system protein. This family contains both type II and type IV pathway secretion proteins from bacteria. VirB11 ATPase is a subunit of the Agrobacterium tumefaciens transfer DNA (T-DNA) transfer system, a type IV secretion pathway required for delivery of T-DNA and effector proteins to plant cells during infection.
Probab=92.30 E-value=0.26 Score=26.44 Aligned_cols=41 Identities=24% Similarity=0.465 Sum_probs=29.3
Q ss_pred CHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf 9999999999999997598743379999707886257899999997233
Q gi|254781225|r 479 SEEVMDYFTRCVGMALLGGNKAQRFIHIRGVGGSGKSTLMNLIKYAFGN 527 (789)
Q Consensus 479 d~e~~~~l~~~~g~~l~g~~~~~~~~~~~G~G~nGKSt~~~~l~~llG~ 527 (789)
T Consensus 125 ~~~~~~~L~~~v--------~~~~~ilIsG~TGSGKTT~l~all~~i~~ 165 (283)
T pfam00437 125 DADIAEFLRQAV--------QARGNILVSGGTGSGKTTLLYALLNEINT 165 (283)
T ss_pred HHHHHHHHHHHH--------HCCCEEEEECCCCCCHHHHHHHHHHHCCC
T ss_conf 599999999999--------81975999889999889999999984087