HHsearch alignment for GI: 254781225 and conserved domain: pfam08800

>pfam08800 VirE_N VirE N-terminal domain. This presumed domain is found at the N-terminus of VirE proteins.

Probab=90.39  E-value=0.76  Score=23.35  Aligned_cols=46  Identities=20%  Similarity=0.211  Sum_probs=23.4

Q ss_pred             CCEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCCC-EEEEEEE
Q ss_conf             987999964688125678999876418997699678896-5999950
Q gi|254781225|r   63 QPLYAFDIDSKDEKTANTFKDTFEILHGTPIVRIGQKPK-ILIPFRM  108 (789)
Q Consensus        63 ~glv~iDiD~~d~~~~~~~~~~~~~l~g~p~~~~g~~~~-~~~~yr~  108 (789)
T Consensus        31 sgli~lDiD~l~~ee~~~~r~~l~~dp~t~~~FvSpSG~GvKi~V~~   77 (136)
T pfam08800        31 NGLVCLDVDHLAKEELERVKQKAAALPYTVLAFISSSGRGVKIWVRF   77 (136)
T ss_pred             CCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEE
T ss_conf             88089982899989999999998469948999985799879999997