HHsearch results for GI: 254781225 and protein with PDBid: 1dp7_P

>1dp7_P MHC class II transcription factor HRFX1; winged helix, protein- DNA conovel mode of DNA recognition, transcription/DNA complex; HET: DNA BRU; 1.50A {Synthetic} SCOP: a.4.5.20

Probab=98.42  E-value=8.3e-07  Score=61.50  Aligned_cols=75  Identities=16%  Similarity=0.268  Sum_probs=65.4

Q ss_pred             HHHHHHHEEECCCCEECHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEEEEEECC
Q ss_conf             88875432626884111799999999999850466755545256899998635423331001025676520899798656
Q gi|254781225|r  694 QAWIDDCCDIGENLWEESHSLAKSYSEYREQELNYDRKRISTRTVTLNLKQKGFIGGIKREKIEKEWKSKRIIKGLKLKP  773 (789)
Q Consensus       694 ~~fi~e~ce~~~~~~~~~~~l~~~y~~~~~~~~~~~~~~~s~~~~~~~l~~~g~~~~~~~~~~~~~~~~~r~~~Gi~Lk~  773 (789)
                      -+||.+.||.+++..++..+||+.|.+||+.++   .++++...|++.++.. | ++++..+...++.++..|.||+||.
T Consensus         2 ~~WL~~~~e~~~~~svpr~~lY~~Y~~~C~~~~---~~~l~~a~Fgk~ir~v-F-P~v~~rRlg~rG~skyhY~Gi~lka   76 (76)
T 1dp7_P            2 VQWLLDNYETAEGVSLPRSTLYNHYLLHSQEQK---LEPVNAASFGKLIRSV-F-MGLRTRRLGTRGNSKYHYYGLRIKA   76 (76)
T ss_dssp             HHHHHHHEEEEEEEEEEHHHHHHHHHHHHHHTT---CCCCCHHHHHHHHHHH-S-TTCEEEEESSTTCCEEEEEEEEECC
T ss_pred             HHHHHHHCEECCCCEEEHHHHHHHHHHHHHHCC---CCCCCHHHHHHHHHHH-C-CCCCEEECCCCCCCEEEEEEEEECC
T ss_conf             557775548789965607999999999999859---9667777899999998-8-9973000698997548996069639