HHsearch results for GI: 254781225 and protein with PDBid: 1iqp_A
>1iqp_A RFCS; clamp loader, extended AAA-ATPase domain, complex with ADP, replication; HET: ADP; 2.80A {Pyrococcus furiosus} SCOP: a.80.1.1 c.37.1.20
Probab=93.30 E-value=0.074 Score=28.62 Aligned_cols=140 Identities=12% Similarity=0.083 Sum_probs=69.4
Q ss_pred HHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCC----CCCCCHHHHHHCCCCCCCCC
Q ss_conf 88879999999999999999759874337999970788625789999999723300----03442676420124555568
Q gi|254781225|r 474 SGYFESEEVMDYFTRCVGMALLGGNKAQRFIHIRGVGGSGKSTLMNLIKYAFGNQY----VINAEASDIMQNRPPEAGKA 549 (789)
Q Consensus 474 ~~~~~d~e~~~~l~~~~g~~l~g~~~~~~~~~~~G~G~nGKSt~~~~l~~llG~~~----~~~~~~~~~~~~~~~~~~~~ 549 (789)
+++.|.++.++.|+.++-. +... .++++|+-|.||+|+..++..-++... ....................
T Consensus 25 ~dlig~~~~~~~L~~~~~~---~~~p---~lll~Gp~G~GKTtla~~lak~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (327)
T 1iqp_A 25 DDIVGQEHIVKRLKHYVKT---GSMP---HLLFAGPPGVGKTTAALALARELFGENWRHNFLELNASDERGINVIREKVK 98 (327)
T ss_dssp TTCCSCHHHHHHHHHHHHH---TCCC---EEEEESCTTSSHHHHHHHHHHHHHGGGHHHHEEEEETTCHHHHHTTHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHC---CCCC---EEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHH
T ss_conf 9923969999999999977---9998---698789899999999999999976401477711344545566489999999
Q ss_pred CHHHH---HHCCCEEEEEECCCCCCCCCCCEEEEEECCCEEEEEECCCCCCEEEECCEEEEEECCCCCCCCCCCCCEEEE
Q ss_conf 98899---738980999934677760131002454159858732104786068714528999738863426798416646
Q gi|254781225|r 550 NPSLI---RLMGSRIVIISETNENDEINAAKIKQMTGGDCMTARLNYGNTYSESPASFTPFIVPNKHLFVRNPDDAWWRR 626 (789)
Q Consensus 550 ~~~la---~l~g~r~~~~~E~~~~~~~~~~~~K~ltggD~i~ar~~~~~~~~~~~p~~~~~~~~N~~P~~~~~d~~~~rR 626 (789)
.+... .-...+++++.|.+....-....++ +...++.-...+++.||+...+. ..+-+|
T Consensus 99 ~~~~~~~~~~~~~~viiide~~~~~~~~~~~Ll---------------~~le~~~~~~~~i~~~~~~~~i~---~~l~sr 160 (327)
T 1iqp_A 99 EFARTKPIGGASFKIIFLDEADALTQDAQQALR---------------RTMEMFSSNVRFILSCNYSSKII---EPIQSR 160 (327)
T ss_dssp HHHHSCCGGGCSCEEEEEETGGGSCHHHHHHHH---------------HHHHHTTTTEEEEEEESCGGGSC---HHHHHT
T ss_pred HHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHH---------------HHHHCCCCCEEEEECCCCHHHCC---HHHHCH
T ss_conf 998631236887269998676646576899999---------------98850577514552368631163---678462
Q ss_pred EEEEECCCCCC
Q ss_conf 89996588788
Q gi|254781225|r 627 YIVIPFDKPIA 637 (789)
Q Consensus 627 ~~iipF~~~~~ 637 (789)
..+|.|+..-+
T Consensus 161 ~~~i~~~~~~~ 171 (327)
T 1iqp_A 161 CAIFRFRPLRD 171 (327)
T ss_dssp EEEEECCCCCH
T ss_pred HHCCCCCCCCH
T ss_conf 32021256777