HHsearch results for GI: 254781225 and protein with PDBid: 1ofh_A

>1ofh_A ATP-dependent HSL protease ATP-binding subunit HSLU; chaperone, hydrolase, ATP-binding; HET: ADP; 2.5A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1ofi_A*
Probab=94.73  E-value=0.021  Score=32.24  Aligned_cols=161  Identities=11%  Similarity=0.104  Sum_probs=78.3

Q ss_pred             HHHHHHHHH-HCCCHHHHHHHHHHHHH--HHCCCC---C---CCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHH
Q ss_conf             789999988-87999999999999999--975987---4---33799997078862578999999972330003442676
Q gi|254781225|r  467 QEFLDLVSG-YFESEEVMDYFTRCVGM--ALLGGN---K---AQRFIHIRGVGGSGKSTLMNLIKYAFGNQYVINAEASD  537 (789)
Q Consensus       467 p~~~~~l~~-~~~d~e~~~~l~~~~g~--~l~g~~---~---~~~~~~~~G~G~nGKSt~~~~l~~llG~~~~~~~~~~~  537 (789)
                      ..+.+.|++ ++|-++.++-+...+-.  ...+..   +   ..+=++|+||.|.||+.+.+.|...++..... .+...
T Consensus         7 ~ei~~~L~~~ViGQd~A~~~l~~~v~~~~~r~~~~~~~~~~~~p~giLl~GPpG~GKT~lAkalA~~l~~~~~~-~~~s~   85 (310)
T 1ofh_A            7 REIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIK-VEATK   85 (310)
T ss_dssp             HHHHHHHHTTCCSCHHHHHHHHHHHHHHHHTTSSCHHHHHHCCCCCEEEECCTTSSHHHHHHHHHHHHTCCEEE-EEGGG
T ss_pred             HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCHHH-CCCCC
T ss_conf             99999865602495999999999999899873457877677898669998999988889999998874321220-35532


Q ss_pred             HHH-CC-CCCCCCCC--------HHHHHHCCCEEEEEECCCCCCCCC---------CCE---EEEEECCCEEEEEECCCC
Q ss_conf             420-12-45555689--------889973898099993467776013---------100---245415985873210478
Q gi|254781225|r  538 IMQ-NR-PPEAGKAN--------PSLIRLMGSRIVIISETNENDEIN---------AAK---IKQMTGGDCMTARLNYGN  595 (789)
Q Consensus       538 ~~~-~~-~~~~~~~~--------~~la~l~g~r~~~~~E~~~~~~~~---------~~~---~K~ltggD~i~ar~~~~~  595 (789)
                      +.. .. ...++.+-        ..+++..-..+++++|.++-..-.         ++.   +-.++-|..+  ..++  
T Consensus        86 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~Iif~DEIdk~~~~~~~~~~~~~~~~v~~~LL~~~dg~~~--~~~~--  161 (310)
T 1ofh_A           86 FTEVGYVGKEVDSIIRDLTDSAGGAIDAVEQNGIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTV--STKH--  161 (310)
T ss_dssp             GSSCCSGGGSTTHHHHHHHHTTTTCHHHHHHHCEEEEECGGGGSCCSSCCSSHHHHHHHHHHHHHHHHCCEE--EETT--
T ss_pred             CCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEE--ECCC--
T ss_conf             110001212555202111233126543245774588605855374557886232455799874288609988--5588--


Q ss_pred             CCEEEECCEEEEEECCCCC--CCCCCCCCEEEEE-EEEECCC
Q ss_conf             6068714528999738863--4267984166468-9996588
Q gi|254781225|r  596 TYSESPASFTPFIVPNKHL--FVRNPDDAWWRRY-IVIPFDK  634 (789)
Q Consensus       596 ~~~~~~p~~~~~~~~N~~P--~~~~~d~~~~rR~-~iipF~~  634 (789)
                      .  ....+..++++++..-  .-.+.+.++.+|+ .+|.|+.
T Consensus       162 ~--~i~~sni~fi~~~a~~~~~~~~~~Pel~~R~d~ii~~~~  201 (310)
T 1ofh_A          162 G--MVKTDHILFIASGAFQVARPSDLIPELQGRLPIRVELTA  201 (310)
T ss_dssp             E--EEECTTCEEEEEECCSSSCGGGSCHHHHHTCCEEEECCC
T ss_pred             E--EEECCCEEEECCCCHHHCCCCCCCHHHHCCCEEEEECCC
T ss_conf             0--897573168715622104823388567477748997478