HHsearch results for GI: 254781225 and protein with PDBid: 1qvr_A
>1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A {Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20 c.37.1.20
Probab=93.90 E-value=0.25 Score=25.10 Aligned_cols=141 Identities=14% Similarity=0.169 Sum_probs=92.4
Q ss_pred HHHHHHHHH-CCCHHHHHHHHHHHHHHHCCCC---CCCEEEEEEECCCCCHHHHHHHHHHH-HCCCC-CCCCCHHHHHHC
Q ss_conf 899999888-7999999999999999975987---43379999707886257899999997-23300-034426764201
Q gi|254781225|r 468 EFLDLVSGY-FESEEVMDYFTRCVGMALLGGN---KAQRFIHIRGVGGSGKSTLMNLIKYA-FGNQY-VINAEASDIMQN 541 (789)
Q Consensus 468 ~~~~~l~~~-~~d~e~~~~l~~~~g~~l~g~~---~~~~~~~~~G~G~nGKSt~~~~l~~l-lG~~~-~~~~~~~~~~~~ 541 (789)
...+.|.+- ++-++.+.-+-+.+--|-.|-+ +.-..|++.|+-+-||+-+...|..+ ||+.. ....+.+.+...
T Consensus 551 ~L~~~L~~rV~gQ~eAI~~Ia~aI~~~raGl~~~~kP~gsfLF~GPtGvGKtelAkaLA~~lFGs~~~lIr~Dmsey~~~ 630 (854)
T 1qvr_A 551 RLEEELHKRVVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEK 630 (854)
T ss_dssp SHHHHHHHHSCSCHHHHHHHHHHHHHHGGGCSCSSSCSEEEEEBSCSSSSHHHHHHHHHHHHHSSGGGEEEECTTTCCSS
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECHHHHCCC
T ss_conf 89999973306828999999999999961799999986589986688732799999999995289751699503674465
Q ss_pred C------CC-------CCCCCCHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEECCCEEEEEECCCCCCEEEECCEEEEE
Q ss_conf 2------45-------5556898899738980999934677760131002454159858732104786068714528999
Q gi|254781225|r 542 R------PP-------EAGKANPSLIRLMGSRIVIISETNENDEINAAKIKQMTGGDCMTARLNYGNTYSESPASFTPFI 608 (789)
Q Consensus 542 ~------~~-------~~~~~~~~la~l~g~r~~~~~E~~~~~~~~~~~~K~ltggD~i~ar~~~~~~~~~~~p~~~~~~ 608 (789)
. |. ..|+--.+-.+-..-.++.+.|.++-..---..|+++.....++ .-+++. +.|.. ..+||
T Consensus 631 ~svsrLiG~ppgyvGy~egG~LteaVr~~P~sVvLlDEIEKAh~~V~~~llq~ld~GrLt--Ds~Gr~-v~f~n-~IIIm 706 (854)
T 1qvr_A 631 HAVSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLT--DSHGRT-VDFRN-TVIIL 706 (854)
T ss_dssp GGGGGC--------------CHHHHHHHCSSEEEEESSGGGSCHHHHHHHHHHHTTTEEC--CSSSCC-EECTT-EEEEE
T ss_pred CCHHHCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCHHHCCHHHHHHHHHHCCCCCEE--CCCCCE-EECCC-EEEEE
T ss_conf 302210279998777056871899998389849997237642899999998752578305--899988-84652-39999
Q ss_pred ECCC
Q ss_conf 7388
Q gi|254781225|r 609 VPNK 612 (789)
Q Consensus 609 ~~N~ 612 (789)
.||-
T Consensus 707 TSN~ 710 (854)
T 1qvr_A 707 TSNL 710 (854)
T ss_dssp ECCT
T ss_pred ECCC
T ss_conf 6650