HHsearch results for GI: 254781225 and protein with PDBid: 1w5s_A
>1w5s_A ORC2; CDC6, DNA replication initiation, DNA binding protein, AAA+ ATPase; HET: ADP; 2.4A {Aeropyrum pernix} SCOP: a.4.5.11 c.37.1.20 PDB: 1w5t_A*
Probab=91.23 E-value=0.55 Score=22.83 Aligned_cols=260 Identities=13% Similarity=0.085 Sum_probs=112.5
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCCCEEEE--EEECCCCCHHHHHHHHHHHHCCCC--------C-----CCC-C-HHH---
Q ss_conf 9999999999999999759874337999--970788625789999999723300--------0-----344-2-676---
Q gi|254781225|r 478 ESEEVMDYFTRCVGMALLGGNKAQRFIH--IRGVGGSGKSTLMNLIKYAFGNQY--------V-----INA-E-ASD--- 537 (789)
Q Consensus 478 ~d~e~~~~l~~~~g~~l~g~~~~~~~~~--~~G~G~nGKSt~~~~l~~llG~~~--------~-----~~~-~-~~~--- 537 (789)
-|.++.+....+....+.|.......++ ++|+.|.|||++.+.+...+.... . ... + ...
T Consensus 27 Re~ei~~l~~~~~~~~~~g~~~~~~~~i~~i~GppGTGKT~~~~~v~~~l~~~~~~~~~~i~~v~in~~~~~t~~~~~~~ 106 (412)
T 1w5s_A 27 RRGEAEALARIYLNRLLSGAGLSDVNMIYGSIGRVGIGKTTLAKFTVKRVSEAAAKEGLTVKQAYVNAFNAPNLYTILSL 106 (412)
T ss_dssp SCHHHHHHHHHHHHHHHTSSCBCCEEEEEECTTCCSSSHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHH
T ss_conf 69999999999999997499999823898466899988999999999999864355568704999324136759999998
Q ss_pred -HHH--CCCCCCCCCCHHHH-------HHCCC-EEEEEECCCCCCCCC---CCEEEEEECCCEEEEEECCCCCCEEEECC
Q ss_conf -420--12455556898899-------73898-099993467776013---10024541598587321047860687145
Q gi|254781225|r 538 -IMQ--NRPPEAGKANPSLI-------RLMGS-RIVIISETNENDEIN---AAKIKQMTGGDCMTARLNYGNTYSESPAS 603 (789)
Q Consensus 538 -~~~--~~~~~~~~~~~~la-------~l~g~-r~~~~~E~~~~~~~~---~~~~K~ltggD~i~ar~~~~~~~~~~~p~ 603 (789)
+.+ ...+..|.+..++. .-.+. .+++++|.+.=.... ...+-.++ .+.... .+. .....
T Consensus 107 i~~~l~~~~~~~g~~~~~~~~~l~~~~~~~~~~~viilDEiD~L~~~~~~~~~~l~~L~-----~~~e~l-~~~-~~~~~ 179 (412)
T 1w5s_A 107 IVRQTGYPIQVRGAPALDILKALVDNLYVENHYLLVILDEFQSMLSSPRIAAEDLYTLL-----RVHEEI-PSR-DGVNR 179 (412)
T ss_dssp HHHHHTCCCCCTTCCHHHHHHHHHHHHHHHTCEEEEEEESTHHHHSCTTSCHHHHHHHH-----THHHHS-CCT-TSCCB
T ss_pred HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCHHHHHHHH-----HHHHHC-CCC-CCCCC
T ss_conf 72002554786673189999999999986068754899730023024442056888999-----998741-021-25662
Q ss_pred EEEEEECCCCCCCCCCCC---CEEEE-EEEEECCCCCCC--------------CCCCHHHH-------HCCCCH--HHHH
Q ss_conf 289997388634267984---16646-899965887888--------------78783342-------201204--4799
Q gi|254781225|r 604 FTPFIVPNKHLFVRNPDD---AWWRR-YIVIPFDKPIAN--------------RDASFAQK-------LETKYT--LEAK 656 (789)
Q Consensus 604 ~~~~~~~N~~P~~~~~d~---~~~rR-~~iipF~~~~~~--------------~d~~~~~~-------~~~~e~--~~i~ 656 (789)
..+++.+|.+......+. .+-.| -..|.|+.-=.+ .+..+.+. ....+. .|..
T Consensus 180 ~~~I~i~n~~~~~~~l~~~~~~~~sr~~~~i~F~pY~~~el~~IL~~R~~~~~~~~~~~~~al~~ia~~~~~~~~~~Gd~ 259 (412)
T 1w5s_A 180 IGFLLVASDVRALSYMREKIPQVESQIGFKLHLPAYKSRELYTILEQRAELGLRDTVWEPRHLELISDVYGEDKGGDGSA 259 (412)
T ss_dssp EEEEEEEEETHHHHHHHHHCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHHBCTTSCCHHHHHHHHHHHCGGGTSCCCH
T ss_pred EEEEEECCCHHHHHHHHHHCCCHHCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCH
T ss_conf 26887247657888888636420012663675699999999999999999734466789899999999987633789999
Q ss_pred HHHHHHHH----HHHHCCCCCCCCHHHHHHHHHHHHHC---CHHH-------HHHHHHEE--ECCCCEECHHHHHHHHHH
Q ss_conf 99999999----99987889887889999999999842---6388-------88754326--268841117999999999
Q gi|254781225|r 657 KWFLKGVK----AYISKGLDVDIPEVCLKAKEEERQGT---DTYQ-------AWIDDCCD--IGENLWEESHSLAKSYSE 720 (789)
Q Consensus 657 ~w~l~g~~----~~~~~g~~~~~p~~v~~a~~~y~~~~---D~v~-------~fi~e~ce--~~~~~~~~~~~l~~~y~~ 720 (789)
.-++.-|. ....+|-.....+.|..|.++..... +.+. ..+...+. ..........++|+.|..
T Consensus 260 R~ai~ll~~A~~~A~~~~~~~It~~~v~~A~~~~~~~~~~~~~~~~l~~~~~~iL~~~~~~~~~~~~~~~~~~~~~~y~~ 339 (412)
T 1w5s_A 260 RRAIVALKMACEMAEAMGRDSLSEDLVRKAVSENEAASIQTHELEALSIHELIILRLIAEATLGGMEWINAGLLRQRYED 339 (412)
T ss_dssp HHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHC------CCSSSSSCHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHH
T ss_conf 99999999999999980899849999999999976521157887249998999999999986469974009999999999
Q ss_pred HHHHCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 99850466755545256899998635
Q gi|254781225|r 721 YREQELNYDRKRISTRTVTLNLKQKG 746 (789)
Q Consensus 721 ~~~~~~~~~~~~~s~~~~~~~l~~~g 746 (789)
.|.+.. +.++++.+.|..-|.++.
T Consensus 340 ~~~~~~--~~~~~~~~~~~~~l~~Le 363 (412)
T 1w5s_A 340 ASLTMY--NVKPRGYTQYHIYLKHLT 363 (412)
T ss_dssp HHHHHS--CCCCCCHHHHHHHHHHHH
T ss_pred HHHHHC--CCCCCCHHHHHHHHHHHH
T ss_conf 998753--788742989999999999