HHsearch results for GI: 254781225 and protein with PDBid: 2qp9_X
>2qp9_X Vacuolar protein sorting-associated protein 4; ATPase domain, beta domain, C-terminal helix, ATP-binding, endosome, nucleotide-binding; 2.90A {Saccharomyces cerevisiae} PDB: 2qpa_A*
Probab=95.90 E-value=0.0035 Score=37.44 Aligned_cols=131 Identities=15% Similarity=0.075 Sum_probs=65.2
Q ss_pred CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCC--CCCCHHHHHHCCCEEEEEECCCCCCCCCC
Q ss_conf 7433799997078862578999999972330003442676420124555--56898899738980999934677760131
Q gi|254781225|r 498 NKAQRFIHIRGVGGSGKSTLMNLIKYAFGNQYVINAEASDIMQNRPPEA--GKANPSLIRLMGSRIVIISETNENDEINA 575 (789)
Q Consensus 498 ~~~~~~~~~~G~G~nGKSt~~~~l~~llG~~~~~~~~~~~~~~~~~~~~--~~~~~~la~l~g~r~~~~~E~~~~~~~~~ 575 (789)
....+-++|+|+-|+|||++.+.|..-+|-.........+++..-+... -..-+..++...-.++++.|.+.--.
T Consensus 81 ~~p~~giLL~GPpGtGKT~la~aiA~e~~~~~~~v~~~~l~s~~~g~~e~~l~~~f~~a~~~~p~il~iDeid~l~~--- 157 (355)
T 2qp9_X 81 RKPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDQVDALTG--- 157 (355)
T ss_dssp CCCCCCEEEECSTTSCHHHHHHHHHHHHTCEEEEEEHHHHHSCC---CHHHHHHHHHHHHHTSSEEEEEECGGGGTC---
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEECCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHH---
T ss_conf 99996268879999988999999998608996130088861455538999999999999854990686310355553---
Q ss_pred CEEEEEECCCEEEEE-EC-CCCCCEEEECCEEEEEECCCCCCCCCCCCCEEEEEE-EEECCC
Q ss_conf 002454159858732-10-478606871452899973886342679841664689-996588
Q gi|254781225|r 576 AKIKQMTGGDCMTAR-LN-YGNTYSESPASFTPFIVPNKHLFVRNPDDAWWRRYI-VIPFDK 634 (789)
Q Consensus 576 ~~~K~ltggD~i~ar-~~-~~~~~~~~~p~~~~~~~~N~~P~~~~~d~~~~rR~~-iipF~~ 634 (789)
.......+.+..... .+ .-+..........++.+||++- .-|.++.||+- .|.|..
T Consensus 158 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~vivI~tTN~p~---~ld~al~rRfd~~i~i~~ 216 (355)
T 2qp9_X 158 TRGEGESEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPW---QLDSAIRRRFERRIYIPL 216 (355)
T ss_dssp ------CTHHHHHHHHHHHHHHHCC---CCEEEEEEESCGG---GSCHHHHHTCCEEEECCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCH---HCCHHHHCHHHEEEEECC
T ss_conf 15777753169999999999862434578648996079803---258988572132876279