HHsearch results for GI: 254781225 and protein with PDBid: 2x8a_A
>2x8a_A Nuclear valosin-containing protein-like; nuclear protein; 2.60A {Homo sapiens}
Probab=91.44 E-value=0.17 Score=26.27 Aligned_cols=71 Identities=11% Similarity=0.096 Sum_probs=42.8
Q ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCC--CCCCCHHHHHHCCCEEEEEECCCC
Q ss_conf 43379999707886257899999997233000344267642012455--556898899738980999934677
Q gi|254781225|r 499 KAQRFIHIRGVGGSGKSTLMNLIKYAFGNQYVINAEASDIMQNRPPE--AGKANPSLIRLMGSRIVIISETNE 569 (789)
Q Consensus 499 ~~~~~~~~~G~G~nGKSt~~~~l~~llG~~~~~~~~~~~~~~~~~~~--~~~~~~~la~l~g~r~~~~~E~~~ 569 (789)
...+-++++|+-|.|||++.+.+..-+|-.........+.+...+.. .-..-++.|+-...-++++.|.+.
T Consensus 42 ~~~~giLL~GppGtGKT~la~aia~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~f~~a~~~~p~il~~d~~~~ 114 (274)
T 2x8a_A 42 VTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDA 114 (274)
T ss_dssp CCCSEEEEESSTTSCHHHHHHHHHHHTTCEEEEEETTTTCSSTTHHHHHHHHHHHHHHHHTCSEEEEEETCTT
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCHH
T ss_conf 9887268878999886289999999827871897647833403661679999999987762995898501033