HHsearch results for GI: 254781225 and protein with PDBid: 2x8a_A

>2x8a_A Nuclear valosin-containing protein-like; nuclear protein; 2.60A {Homo sapiens}
Probab=91.44  E-value=0.17  Score=26.27  Aligned_cols=71  Identities=11%  Similarity=0.096  Sum_probs=42.8

Q ss_pred             CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCC--CCCCCHHHHHHCCCEEEEEECCCC
Q ss_conf             43379999707886257899999997233000344267642012455--556898899738980999934677
Q gi|254781225|r  499 KAQRFIHIRGVGGSGKSTLMNLIKYAFGNQYVINAEASDIMQNRPPE--AGKANPSLIRLMGSRIVIISETNE  569 (789)
Q Consensus       499 ~~~~~~~~~G~G~nGKSt~~~~l~~llG~~~~~~~~~~~~~~~~~~~--~~~~~~~la~l~g~r~~~~~E~~~  569 (789)
                      ...+-++++|+-|.|||++.+.+..-+|-.........+.+...+..  .-..-++.|+-...-++++.|.+.
T Consensus        42 ~~~~giLL~GppGtGKT~la~aia~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~f~~a~~~~p~il~~d~~~~  114 (274)
T 2x8a_A           42 VTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDA  114 (274)
T ss_dssp             CCCSEEEEESSTTSCHHHHHHHHHHHTTCEEEEEETTTTCSSTTHHHHHHHHHHHHHHHHTCSEEEEEETCTT
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCHH
T ss_conf             9887268878999886289999999827871897647833403661679999999987762995898501033