HHsearch results for GI: 254781225 and protein with PDBid: 2zan_A

>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=96.58  E-value=0.0018  Score=39.34  Aligned_cols=155  Identities=15%  Similarity=0.062  Sum_probs=73.8

Q ss_pred             HHCCCHHHHHHHHHHHHHHHC------CCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCH-HHHHHCCC--CC
Q ss_conf             887999999999999999975------9874337999970788625789999999723300034426-76420124--55
Q gi|254781225|r  475 GYFESEEVMDYFTRCVGMALL------GGNKAQRFIHIRGVGGSGKSTLMNLIKYAFGNQYVINAEA-SDIMQNRP--PE  545 (789)
Q Consensus       475 ~~~~d~e~~~~l~~~~g~~l~------g~~~~~~~~~~~G~G~nGKSt~~~~l~~llG~~~~~~~~~-~~~~~~~~--~~  545 (789)
                      +|.|-+++.+.|++.+-+-|.      +.....+-++|||+.|+|||++.+.|..-++......++. .+.....+  ..
T Consensus       135 di~Gl~~~k~~l~e~v~~pl~~~~~~~~~~~p~rgiLL~GPPGtGKT~lakaiA~e~~~~~~~~v~~s~l~~~~~g~se~  214 (444)
T 2zan_A          135 DVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEK  214 (444)
T ss_dssp             GSCSCHHHHHHHHHHHTHHHHCTTTTSGGGCCCSEEEEECSTTSSHHHHHHHHHHHCCSSEEEEECCC---------CCC
T ss_pred             HHCCHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHH
T ss_conf             96599999999999999997499977489999971477798999789999999987216855987132123665156889


Q ss_pred             CCCCCHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEECCCEEEEEECC-CCCCEEEECCEEEEEECCCCCCCCCCCCCEE
Q ss_conf             556898899738980999934677760131002454159858732104-7860687145289997388634267984166
Q gi|254781225|r  546 AGKANPSLIRLMGSRIVIISETNENDEINAAKIKQMTGGDCMTARLNY-GNTYSESPASFTPFIVPNKHLFVRNPDDAWW  624 (789)
Q Consensus       546 ~~~~~~~la~l~g~r~~~~~E~~~~~~~~~~~~K~ltggD~i~ar~~~-~~~~~~~~p~~~~~~~~N~~P~~~~~d~~~~  624 (789)
                      .-..-++.|+.....++++.|.+.-..-..+.-..  +...+....+. -+.+..-.....++.+||++   ..-|.++.
T Consensus       215 ~i~~~f~~a~~~~p~ii~iDeid~l~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~vlvi~aTN~p---~~lD~Al~  289 (444)
T 2zan_A          215 LVKNLFQLARENKPSIIFIDEIDSLCGSRSENESE--AARRIKTEFLVQMQGVGVDNDGILVLGATNIP---WVLDSAIR  289 (444)
T ss_dssp             THHHHHHHHHHSCSEEEEESCTTTTCCCSSCCCCG--GGHHHHHHHHTTTTCSSCCCSSCEEEEEESCG---GGSCHHHH
T ss_pred             HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCH--HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCC---CCCCHHHH
T ss_conf             99999999997088531025555530366665430--47889999999986034678987898506997---66879898


Q ss_pred             EEEE-EEECCC
Q ss_conf             4689-996588
Q gi|254781225|r  625 RRYI-VIPFDK  634 (789)
Q Consensus       625 rR~~-iipF~~  634 (789)
                      ||+- .|.|+.
T Consensus       290 rRfd~~I~i~~  300 (444)
T 2zan_A          290 RRFEKRIYIPL  300 (444)
T ss_dssp             TTCCEEEECCC
T ss_pred             HHCCEEEEECC
T ss_conf             13617988589