HHsearch results for GI: 254781225 and protein with PDBid: 2zan_A
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=96.58 E-value=0.0018 Score=39.34 Aligned_cols=155 Identities=15% Similarity=0.062 Sum_probs=73.8
Q ss_pred HHCCCHHHHHHHHHHHHHHHC------CCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCH-HHHHHCCC--CC
Q ss_conf 887999999999999999975------9874337999970788625789999999723300034426-76420124--55
Q gi|254781225|r 475 GYFESEEVMDYFTRCVGMALL------GGNKAQRFIHIRGVGGSGKSTLMNLIKYAFGNQYVINAEA-SDIMQNRP--PE 545 (789)
Q Consensus 475 ~~~~d~e~~~~l~~~~g~~l~------g~~~~~~~~~~~G~G~nGKSt~~~~l~~llG~~~~~~~~~-~~~~~~~~--~~ 545 (789)
+|.|-+++.+.|++.+-+-|. +.....+-++|||+.|+|||++.+.|..-++......++. .+.....+ ..
T Consensus 135 di~Gl~~~k~~l~e~v~~pl~~~~~~~~~~~p~rgiLL~GPPGtGKT~lakaiA~e~~~~~~~~v~~s~l~~~~~g~se~ 214 (444)
T 2zan_A 135 DVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEK 214 (444)
T ss_dssp GSCSCHHHHHHHHHHHTHHHHCTTTTSGGGCCCSEEEEECSTTSSHHHHHHHHHHHCCSSEEEEECCC---------CCC
T ss_pred HHCCHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHH
T ss_conf 96599999999999999997499977489999971477798999789999999987216855987132123665156889
Q ss_pred CCCCCHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEECCCEEEEEECC-CCCCEEEECCEEEEEECCCCCCCCCCCCCEE
Q ss_conf 556898899738980999934677760131002454159858732104-7860687145289997388634267984166
Q gi|254781225|r 546 AGKANPSLIRLMGSRIVIISETNENDEINAAKIKQMTGGDCMTARLNY-GNTYSESPASFTPFIVPNKHLFVRNPDDAWW 624 (789)
Q Consensus 546 ~~~~~~~la~l~g~r~~~~~E~~~~~~~~~~~~K~ltggD~i~ar~~~-~~~~~~~~p~~~~~~~~N~~P~~~~~d~~~~ 624 (789)
.-..-++.|+.....++++.|.+.-..-..+.-.. +...+....+. -+.+..-.....++.+||++ ..-|.++.
T Consensus 215 ~i~~~f~~a~~~~p~ii~iDeid~l~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~vlvi~aTN~p---~~lD~Al~ 289 (444)
T 2zan_A 215 LVKNLFQLARENKPSIIFIDEIDSLCGSRSENESE--AARRIKTEFLVQMQGVGVDNDGILVLGATNIP---WVLDSAIR 289 (444)
T ss_dssp THHHHHHHHHHSCSEEEEESCTTTTCCCSSCCCCG--GGHHHHHHHHTTTTCSSCCCSSCEEEEEESCG---GGSCHHHH
T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCH--HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCC---CCCCHHHH
T ss_conf 99999999997088531025555530366665430--47889999999986034678987898506997---66879898
Q ss_pred EEEE-EEECCC
Q ss_conf 4689-996588
Q gi|254781225|r 625 RRYI-VIPFDK 634 (789)
Q Consensus 625 rR~~-iipF~~ 634 (789)
||+- .|.|+.
T Consensus 290 rRfd~~I~i~~ 300 (444)
T 2zan_A 290 RRFEKRIYIPL 300 (444)
T ss_dssp TTCCEEEECCC
T ss_pred HHCCEEEEECC
T ss_conf 13617988589