HHsearch results for GI: 254781225 and protein with PDBid: 3cf0_A
>3cf0_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48, acetylation, ATP-binding, cytoplasm, lipid-binding, nucleotide-binding; HET: ADP; 3.00A {Mus musculus}
Probab=96.38 E-value=0.017 Score=32.90 Aligned_cols=95 Identities=13% Similarity=0.069 Sum_probs=54.4
Q ss_pred HHCCCHHHHHHHHHHHHHHHCC-------CCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCC-
Q ss_conf 8879999999999999999759-------87433799997078862578999999972330003442676420124555-
Q gi|254781225|r 475 GYFESEEVMDYFTRCVGMALLG-------GNKAQRFIHIRGVGGSGKSTLMNLIKYAFGNQYVINAEASDIMQNRPPEA- 546 (789)
Q Consensus 475 ~~~~d~e~~~~l~~~~g~~l~g-------~~~~~~~~~~~G~G~nGKSt~~~~l~~llG~~~~~~~~~~~~~~~~~~~~- 546 (789)
+|.|-++..+.+++.+-+.|.. +....+-++++|+.|+|||++.+.+...+|-.........+.+...+...
T Consensus 16 di~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~gvLl~GppGtGKT~la~aia~~~~~~~~~i~~s~l~~~~~~~~~~ 95 (301)
T 3cf0_A 16 DIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 95 (301)
T ss_dssp GSCSCHHHHHHHHHHHHHHHHCHHHHHHHCCCCCSEEEEECSSSSSHHHHHHHHHHHTTCEEEEECHHHHHHHHHTTCTT
T ss_pred HHCCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCCHHH
T ss_conf 94786999999999999987499999867999886378879999988999999999949976998879951344650689
Q ss_pred -CCCCHHHHHHCCCEEEEEECCCC
Q ss_conf -56898899738980999934677
Q gi|254781225|r 547 -GKANPSLIRLMGSRIVIISETNE 569 (789)
Q Consensus 547 -~~~~~~la~l~g~r~~~~~E~~~ 569 (789)
-..-++.|....-.++++.|.+.
T Consensus 96 ~~~~~f~~a~~~~p~il~iDeid~ 119 (301)
T 3cf0_A 96 NVREIFDKARQAAPCVLFFDELDS 119 (301)
T ss_dssp HHHHHHHHHHHTCSEEEEECSTTH
T ss_pred HHHHHHHHHHHCCCCEEEEECCCC
T ss_conf 999999999973994797403554