RPSBLAST alignment of GI: 254781225 and protein with PDBid: 1tue

>1tue_A Replication protein E1; helicase, replication, E1E2 complex, AAA+ protein; 2.10A {Human papillomavirus type 18} SCOP: c.37.1.20 Length = 212
 Score = 39.0 bits (91), Expect = 0.004
 Identities = 25/168 (14%), Positives = 47/168 (27%), Gaps = 24/168 (14%)

Query: 494 LLGGNKAQRFIHIRGVGGSGKSTL-MNLIKYAFGNQYVINAEASDIMQNRPPEAGKANPS 552
            L G   +  +   G   +GKS   M+ I +  G         S             +  
Sbjct: 51  FLKGTPKKNCLVFCGPANTGKSYFGMSFIHFIQGAVISFVNSTS-------------HFW 97

Query: 553 LIRLMGSRIVIISE-TNENDEINAAKIKQMTGGDCMTARLNYGNTYSESPASFTPFIV-P 610
           L  L  +++ ++ + T          ++    G+ ++    +            P ++  
Sbjct: 98  LEPLTDTKVAMLDDATTTCWTYFDTYMRNALDGNPISIDRKHKPLIQLK---CPPILLTT 154

Query: 611 NKHLFVRNPDDAWWRRYIVIPFDKPIANRDASFAQKLETKYTLEAKKW 658
           N H    N       R  V  F          F +     Y +  K W
Sbjct: 155 NIHPAKDNRWPYLESRITVFEFPNAF-----PFDKNGNPVYEINDKNW 197