RPSBLAST alignment of GI: 254781225 and protein with PDBid: 1tue
>1tue_A Replication protein E1; helicase, replication, E1E2 complex, AAA+ protein; 2.10A {Human papillomavirus type 18} SCOP: c.37.1.20 Length = 212
Score = 39.0 bits (91), Expect = 0.004
Identities = 25/168 (14%), Positives = 47/168 (27%), Gaps = 24/168 (14%)
Query: 494 LLGGNKAQRFIHIRGVGGSGKSTL-MNLIKYAFGNQYVINAEASDIMQNRPPEAGKANPS 552
L G + + G +GKS M+ I + G S +
Sbjct: 51 FLKGTPKKNCLVFCGPANTGKSYFGMSFIHFIQGAVISFVNSTS-------------HFW 97
Query: 553 LIRLMGSRIVIISE-TNENDEINAAKIKQMTGGDCMTARLNYGNTYSESPASFTPFIV-P 610
L L +++ ++ + T ++ G+ ++ + P ++
Sbjct: 98 LEPLTDTKVAMLDDATTTCWTYFDTYMRNALDGNPISIDRKHKPLIQLK---CPPILLTT 154
Query: 611 NKHLFVRNPDDAWWRRYIVIPFDKPIANRDASFAQKLETKYTLEAKKW 658
N H N R V F F + Y + K W
Sbjct: 155 NIHPAKDNRWPYLESRITVFEFPNAF-----PFDKNGNPVYEINDKNW 197