BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254781226|ref|YP_003065639.1| hypothetical protein
CLIBASIA_05665 [Candidatus Liberibacter asiaticus str. psy62]
(129 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254781226|ref|YP_003065639.1| hypothetical protein CLIBASIA_05665 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040903|gb|ACT57699.1| hypothetical protein CLIBASIA_05665 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 129
Score = 248 bits (632), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 129/129 (100%), Positives = 129/129 (100%)
Query: 1 MGRKVLTPEERMLCRREYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKY 60
MGRKVLTPEERMLCRREYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKY
Sbjct: 1 MGRKVLTPEERMLCRREYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKY 60
Query: 61 REYKRRYYLKNRDKMREKARQSYRKLYSKDSWIAPEEPMGMTKAEIEALEREIARLKAKP 120
REYKRRYYLKNRDKMREKARQSYRKLYSKDSWIAPEEPMGMTKAEIEALEREIARLKAKP
Sbjct: 61 REYKRRYYLKNRDKMREKARQSYRKLYSKDSWIAPEEPMGMTKAEIEALEREIARLKAKP 120
Query: 121 IEELIYKRG 129
IEELIYKRG
Sbjct: 121 IEELIYKRG 129
>gi|317120691|gb|ADV02514.1| hypothetical protein SC1_gp170 [Liberibacter phage SC1]
gi|317120835|gb|ADV02656.1| hypothetical protein SC1_gp170 [Candidatus Liberibacter asiaticus]
Length = 129
Score = 236 bits (601), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 123/129 (95%), Positives = 126/129 (97%)
Query: 1 MGRKVLTPEERMLCRREYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKY 60
M RKVLTPEERMLCRREYKRRYYLKNRDKILERRRRRYLKNKDKI+E+ HQYYLKNKDKY
Sbjct: 1 MERKVLTPEERMLCRREYKRRYYLKNRDKILERRRRRYLKNKDKIKENNHQYYLKNKDKY 60
Query: 61 REYKRRYYLKNRDKMREKARQSYRKLYSKDSWIAPEEPMGMTKAEIEALEREIARLKAKP 120
REYKRRYYLKNRDKMREKARQSYRKLYSKDSWIAPEEPMGMTKAEIEALEREIARLKAKP
Sbjct: 61 REYKRRYYLKNRDKMREKARQSYRKLYSKDSWIAPEEPMGMTKAEIEALEREIARLKAKP 120
Query: 121 IEELIYKRG 129
IEELIYK+
Sbjct: 121 IEELIYKKA 129
>gi|317120733|gb|ADV02555.1| hypothetical protein SC2_gp170 [Liberibacter phage SC2]
gi|317120794|gb|ADV02615.1| hypothetical protein SC2_gp170 [Candidatus Liberibacter asiaticus]
Length = 129
Score = 234 bits (597), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 123/129 (95%), Positives = 125/129 (96%)
Query: 1 MGRKVLTPEERMLCRREYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKY 60
M RKVLTPEERMLCRREYKRRYYLKNRDKILERRRRRYLKNKDKI+E HQYYLKNKDKY
Sbjct: 1 MERKVLTPEERMLCRREYKRRYYLKNRDKILERRRRRYLKNKDKIQEYSHQYYLKNKDKY 60
Query: 61 REYKRRYYLKNRDKMREKARQSYRKLYSKDSWIAPEEPMGMTKAEIEALEREIARLKAKP 120
REYKRRYYLKNRDKMREKARQSYRKLYSKDSWIAPEEPMGMTKAEIEALEREIARLKAKP
Sbjct: 61 REYKRRYYLKNRDKMREKARQSYRKLYSKDSWIAPEEPMGMTKAEIEALEREIARLKAKP 120
Query: 121 IEELIYKRG 129
IEELIYK+
Sbjct: 121 IEELIYKKA 129
>gi|315121957|ref|YP_004062446.1| hypothetical protein CKC_01035 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|315122925|ref|YP_004063414.1| hypothetical protein CKC_05905 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495359|gb|ADR51958.1| hypothetical protein CKC_01035 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496327|gb|ADR52926.1| hypothetical protein CKC_05905 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 31
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/31 (80%), Positives = 27/31 (87%)
Query: 99 MGMTKAEIEALEREIARLKAKPIEELIYKRG 129
M MTK EIEALE +IARLKAKP+EELIYKR
Sbjct: 1 MEMTKGEIEALEAKIARLKAKPLEELIYKRA 31
>gi|157953109|ref|YP_001498001.1| hypothetical protein NY2A_B805R [Paramecium bursaria Chlorella
virus NY2A]
gi|155123336|gb|ABT15204.1| hypothetical protein NY2A_B805R [Paramecium bursaria Chlorella
virus NY2A]
Length = 340
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 11/73 (15%)
Query: 16 REYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYR-----------EYK 64
+E KR+Y +N++ ILE+ R+ Y +NK++I+E QYY NKDK R EYK
Sbjct: 51 QEKKRQYREENKEHILEKARQYYEENKEEIQEKNRQYYEDNKDKIRQYREDNKDKILEYK 110
Query: 65 RRYYLKNRDKMRE 77
R+YY NR+K+++
Sbjct: 111 RQYYEDNREKIQQ 123
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 49/68 (72%)
Query: 16 REYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKM 75
++Y+R+Y +N++ ILE+ R+ Y +NK++I+E QY +NK+ E R+YY +N++++
Sbjct: 21 KDYQRQYREENKEHILEKARQYYEENKEEIQEKKRQYREENKEHILEKARQYYEENKEEI 80
Query: 76 REKARQSY 83
+EK RQ Y
Sbjct: 81 QEKNRQYY 88
Score = 41.6 bits (96), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 42/58 (72%)
Query: 20 RRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKMRE 77
R+YY +N+++I E++R+ +NK+ I E QYY +NK++ +E R+YY N+DK+R+
Sbjct: 40 RQYYEENKEEIQEKKRQYREENKEHILEKARQYYEENKEEIQEKNRQYYEDNKDKIRQ 97
>gi|167044410|gb|ABZ09087.1| hypothetical protein ALOHA_HF4000APKG6D3ctg6g4 [uncultured marine
crenarchaeote HF4000_APKG6D3]
Length = 308
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 49/74 (66%)
Query: 5 VLTPEERMLCRREYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYK 64
VL+ EER RRE R++ +N +KI E R+ KN +KI E+ +Y +N +K RE +
Sbjct: 2 VLSDEERKRKRRELTRKWKKENPEKIREGGRKYRAKNPEKISEAKKKYNRENPEKVREKR 61
Query: 65 RRYYLKNRDKMREK 78
R+YY +NR+K+REK
Sbjct: 62 RKYYEENREKIREK 75
Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%)
Query: 16 REYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKM 75
+E + ++Y +NR+KI ERRR+ Y +N +KI E + Y KN +K E +R+Y +N +K+
Sbjct: 88 KEARSKHYEENREKINERRRKDYEENHEKINERRRKDYKKNPEKINERRRKYRKENPEKV 147
Query: 76 REKARQSYRKLYSK 89
RE R+ Y K + K
Sbjct: 148 RESKRKDYEKNHEK 161
Score = 40.4 bits (93), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%)
Query: 17 EYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKMR 76
E +R+ Y +N +KI ERRR+ Y KN +KI E +Y +N +K RE KR+ Y KN +K++
Sbjct: 104 ERRRKDYEENHEKINERRRKDYKKNPEKINERRRKYRKENPEKVRESKRKDYEKNHEKIK 163
Query: 77 EKARQ 81
E+ ++
Sbjct: 164 ERVKK 168
Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 50/73 (68%)
Query: 17 EYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKMR 76
E K++Y +N +K+ E+RR+ Y +N++KIRE +Y +N +K +E + ++Y +NR+K+
Sbjct: 44 EAKKKYNRENPEKVREKRRKYYEENREKIREKQIKYLEENPEKIKEARSKHYEENREKIN 103
Query: 77 EKARQSYRKLYSK 89
E+ R+ Y + + K
Sbjct: 104 ERRRKDYEENHEK 116
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 50/70 (71%)
Query: 16 REYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKM 75
RE +R+YY +NR+KI E++ + +N +KI+E+ ++Y +N++K E +R+ Y +N +K+
Sbjct: 58 REKRRKYYEENREKIREKQIKYLEENPEKIKEARSKHYEENREKINERRRKDYEENHEKI 117
Query: 76 REKARQSYRK 85
E+ R+ Y+K
Sbjct: 118 NERRRKDYKK 127
>gi|315121958|ref|YP_004062447.1| hypothetical protein CKC_01040 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|315122926|ref|YP_004063415.1| hypothetical protein CKC_05910 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495360|gb|ADR51959.1| hypothetical protein CKC_01040 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496328|gb|ADR52927.1| hypothetical protein CKC_05910 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 209
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 5/73 (6%)
Query: 15 RREYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDK 74
R EY+R+YY N++ +E +R+ KNKDKI E Y Q+Y KNKDK E R+YY + ++
Sbjct: 58 RNEYQRQYYQNNKEARIEYQRQYLQKNKDKINEYYRQHYQKNKDKLTENSRQYYQRKKE- 116
Query: 75 MREKARQSYRKLY 87
AR Y++LY
Sbjct: 117 ----ARIEYQRLY 125
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 15/84 (17%)
Query: 17 EYKRRYYLKNRDKILERRR--------------RRYLKNKDKIRESYHQYYL-KNKDKYR 61
EY R+Y KNRDK+ E +R R+Y +N + R Y + YL KNKDK
Sbjct: 30 EYYRQYQQKNRDKLTENKRLYRQRKKEERNEYQRQYYQNNKEARIEYQRQYLQKNKDKIN 89
Query: 62 EYKRRYYLKNRDKMREKARQSYRK 85
EY R++Y KN+DK+ E +RQ Y++
Sbjct: 90 EYYRQHYQKNKDKLTENSRQYYQR 113
Score = 38.1 bits (87), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 36/54 (66%)
Query: 14 CRREYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRY 67
R EY+R+Y KN+DKI E R+ Y KNKDK+ E+ QYY + K+ EY+R Y
Sbjct: 72 ARIEYQRQYLQKNKDKINEYYRQHYQKNKDKLTENSRQYYQRKKEARIEYQRLY 125
>gi|261367712|ref|ZP_05980595.1| conserved hypothetical protein [Subdoligranulum variabile DSM
15176]
gi|282570507|gb|EFB76042.1| conserved hypothetical protein [Subdoligranulum variabile DSM
15176]
Length = 100
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 19 KRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLK 70
+R +Y NRDK+ ++R Y N+DK+ Y N+DK EY R+YY K
Sbjct: 43 QRAWYEANRDKVAAQQRAWYEANRDKVAAQQRAYREANRDKVAEYNRKYYAK 94
>gi|157953770|ref|YP_001498661.1| hypothetical protein AR158_C580L [Paramecium bursaria Chlorella
virus AR158]
gi|156068418|gb|ABU44125.1| hypothetical protein AR158_C580L [Paramecium bursaria Chlorella
virus AR158]
Length = 310
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%)
Query: 19 KRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKMREK 78
R+Y N +KI ER R+R +N +K RE + KN +KYREY+R+Y + N +K +E
Sbjct: 28 NRKYCTNNAEKIKERGRKRRAENPEKFRERDRKRREKNPEKYREYERKYRIANPEKFKEY 87
Query: 79 ARQSYRKLYSK 89
R+ + +Y K
Sbjct: 88 ERKRHATIYRK 98
>gi|255947256|ref|XP_002564395.1| Pc22g03540 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591412|emb|CAP97642.1| Pc22g03540 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 669
Score = 37.7 bits (86), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 39/72 (54%)
Query: 18 YKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKMRE 77
Y RRYY KN KI + R+ KN DKIR +Y KN D+ + R + KN DK++
Sbjct: 402 YSRRYYRKNAGKIKAKNRKYQRKNADKIRAKRREYERKNADRIKARLREWRRKNADKIKA 461
Query: 78 KARQSYRKLYSK 89
+ R+ RK K
Sbjct: 462 RKREWRRKNADK 473
Score = 37.0 bits (84), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 20 RRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKMREKA 79
R+Y KN DKI +RR KN D+I+ ++ KN DK + KR + KN DK++
Sbjct: 419 RKYQRKNADKIRAKRREYERKNADRIKARLREWRRKNADKIKARKREWRRKNADKIKANN 478
Query: 80 RQSYR 84
R+ YR
Sbjct: 479 REYYR 483
Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%)
Query: 20 RRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKMREKA 79
R Y +N D+I R R KN D+I S ++ KN D+ KR ++ KN D++ +
Sbjct: 524 REYQRENADRIKARNREYQRKNADRISASIQEWRRKNADRVSASKREWHRKNADRVNARQ 583
Query: 80 RQSYRKLYSK 89
R+ RK K
Sbjct: 584 RERRRKNAGK 593
Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 11/78 (14%)
Query: 15 RREYKRR-----------YYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREY 63
RREY+R+ + KN DKI R+R KN DKI+ + +YY +N D+ +
Sbjct: 433 RREYERKNADRIKARLREWRRKNADKIKARKREWRRKNADKIKANNREYYRENADRIKAN 492
Query: 64 KRRYYLKNRDKMREKARQ 81
R Y +N D+++ + R+
Sbjct: 493 NREYQRENADRIKARNRE 510
>gi|2947224|gb|AAC39306.1| ORF4 [Lactococcus phage phi31]
Length = 246
Score = 37.7 bits (86), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%)
Query: 13 LCRREYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNR 72
+CR+ + Y ++KILE+++R Y KN DKI+E YY +NK K R+ ++ + N
Sbjct: 65 VCRKAKDKARYEAKKEKILEQKKRYYEKNADKIKERQLGYYNENKGKCRQSEKDWCKNNP 124
Query: 73 DKMREKARQSYRKLYSKDSWIAPEE 97
+ R +S Y +S + +E
Sbjct: 125 TRRRMTCAKSRTLKYGSESTLTEKE 149
>gi|222624901|gb|EEE59033.1| hypothetical protein OsJ_10782 [Oryza sativa Japonica Group]
Length = 850
Score = 37.4 bits (85), Expect = 0.75, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 10/95 (10%)
Query: 9 EERMLCRREYKRRYYLKNRDKI--LERRRRRYLKNKDKIRESYHQYYL----KNKDKYRE 62
E RML Y R L R++I L+R R +LK D+ + +H+ KNK +
Sbjct: 40 EIRML----YARMDELLYREEIMWLQRSRVAWLKEGDRNTKFFHRQAAWRSKKNKITRLK 95
Query: 63 YKRRYYLKNRDKMREKARQSYRKLYSKDSWIAPEE 97
+ +++N+++M AR+ ++ LY KD+ + P E
Sbjct: 96 AEDSRFVENKEEMEHMAREFFQTLYLKDNSVDPRE 130
>gi|218188462|gb|EEC70889.1| hypothetical protein OsI_02427 [Oryza sativa Indica Group]
Length = 1477
Score = 37.4 bits (85), Expect = 0.76, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 15 RREYKRRYYLKNRDKI--LERRRRRYLKNKDKIRESYHQYYL----KNKDKYREYKRRYY 68
R+ Y R L R+++ L+R R +LK D+ + +H+ KNK + + Y
Sbjct: 564 RKLYARLDELLYREEMMWLQRSRVSWLKEGDRNTKFFHRQAAWRAKKNKINRLKDEDSRY 623
Query: 69 LKNRDKMREKARQSYRKLYSKDSWIAPEEPMGMTKAEIEA 108
++N+ M + R ++KLY++D + P E + + ++A
Sbjct: 624 VENKGDMEKLTRDFFQKLYARDEGVDPGELVDLFDVRVDA 663
>gi|108708055|gb|ABF95850.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 940
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 10/95 (10%)
Query: 9 EERMLCRREYKRRYYLKNRDKI--LERRRRRYLKNKDKIRESYHQYYL----KNKDKYRE 62
E RML Y R L R++I L+R R +LK D+ + +H+ KNK +
Sbjct: 40 EIRML----YARMDELLYREEIMWLQRSRVAWLKEGDRNTKFFHRQAAWRSKKNKITRLK 95
Query: 63 YKRRYYLKNRDKMREKARQSYRKLYSKDSWIAPEE 97
+ +++N+++M AR+ ++ LY KD+ + P E
Sbjct: 96 AEDSRFVENKEEMEHMAREFFQTLYLKDNSVDPRE 130
>gi|315185937|gb|EFU19701.1| permease YjgP/YjgQ family protein [Spirochaeta thermophila DSM
6578]
Length = 424
Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 24 LKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKN----RDKMREKA 79
+K R+++LE++RR + K +D +R S YL E R +L N ++REK
Sbjct: 262 MKEREQVLEQKRRSHEKERDDLRRSVSSLYLTTLSLSNESIRSRFLGNLRSSLQRLREKE 321
Query: 80 R 80
R
Sbjct: 322 R 322
>gi|218192800|gb|EEC75227.1| hypothetical protein OsI_11496 [Oryza sativa Indica Group]
Length = 1059
Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 10/95 (10%)
Query: 9 EERMLCRREYKRRYYLKNRDKI--LERRRRRYLKNKDKIRESYHQYYL----KNKDKYRE 62
E RML Y R L R+++ L+R R +LK D+ + +H+ KNK +
Sbjct: 75 EIRML----YARMDELLYREEMMWLQRSRVAWLKEGDRNTKFFHRQAAWRSKKNKITRLK 130
Query: 63 YKRRYYLKNRDKMREKARQSYRKLYSKDSWIAPEE 97
+ +++N+++M AR+ ++ LY KD+ + P E
Sbjct: 131 AEDSRFVENKEEMEHMAREFFQTLYLKDNSVDPRE 165
>gi|307718798|ref|YP_003874330.1| hypothetical protein STHERM_c11120 [Spirochaeta thermophila DSM
6192]
gi|306532523|gb|ADN02057.1| hypothetical protein STHERM_c11120 [Spirochaeta thermophila DSM
6192]
Length = 424
Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 24 LKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKMREKARQSY 83
+K R+++LE++RR + K +D +R S + YL E R +L + ++ RQ
Sbjct: 262 MKEREQVLEQKRRSHEKERDDLRRSVSRLYLTTLSLSNESIRSRFLGSLRSSLQRLRQKE 321
Query: 84 R 84
R
Sbjct: 322 R 322
>gi|295399960|ref|ZP_06809940.1| conserved hypothetical protein [Geobacillus thermoglucosidasius
C56-YS93]
gi|312110792|ref|YP_003989108.1| hypothetical protein GY4MC1_1723 [Geobacillus sp. Y4.1MC1]
gi|294977739|gb|EFG53337.1| conserved hypothetical protein [Geobacillus thermoglucosidasius
C56-YS93]
gi|311215893|gb|ADP74497.1| hypothetical protein GY4MC1_1723 [Geobacillus sp. Y4.1MC1]
Length = 574
Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 36 RRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKMREKARQ-SYRKLYSKDSWIA 94
+R ++ + ++Y YY K + +EYK+ YYL RD+ RQ ++R L + D +
Sbjct: 437 KRMIRQYNVPSKAYFSYY-KPILESKEYKKNYYLLLRDQGYSPIRQVTFRHLETGDKTLT 495
Query: 95 PEEPMGMTKAEIEALEREIARLKAKPIEEL 124
EP + + +EAL+ ++ A + EL
Sbjct: 496 IIEPQQI-DSFVEALKADLMEESASTMLEL 524
>gi|73541607|ref|YP_296127.1| hypothetical protein Reut_A1918 [Ralstonia eutropha JMP134]
gi|72119020|gb|AAZ61283.1| Uncharacterized protein UPF0065 [Ralstonia eutropha JMP134]
Length = 333
Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 65 RRYYLKNRDKMREKARQSYRKLYSKDSWIAPEEPMGMTKAEIEALEREIARL 116
R L N RE + + D+W+ P G+ KA ++AL RE+AR+
Sbjct: 238 RSALLPNVPTFREAGYKGFEP----DAWMGLMFPAGVPKARVDALSREVARI 285
>gi|307187162|gb|EFN72405.1| Death-inducer obliterator 1 [Camponotus floridanus]
Length = 2322
Score = 34.7 bits (78), Expect = 4.0, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 25 KNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKMREKARQSYR 84
K RDK ER+ R +DK RE + KDK R+ + +R + RE+ RQ +
Sbjct: 1541 KTRDKSKERKSRNKESRRDKDRE-------REKDKDRDRNKDRDKTSRKESRERGRQKEK 1593
Query: 85 KLY-SKDSWI 93
+ S DSW+
Sbjct: 1594 DRHKSSDSWM 1603
>gi|301309131|ref|ZP_07215075.1| putative nuclease sbcCD, subunit C [Bacteroides sp. 20_3]
gi|300832813|gb|EFK63439.1| putative nuclease sbcCD, subunit C [Bacteroides sp. 20_3]
Length = 993
Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 54 LKNKDKYREYKRRYYLKNRDKMREKARQSYRKLYSKDSWI--APEEPMGMTKAEIEALER 111
L ++Y E RR + KN + A+++Y +LY++ I EE + ++ + ALE
Sbjct: 193 LTGTEQYSEISRRIFAKNTE-----AKEAYEQLYARVQGIELLSEEEVEASQTRLSALEV 247
Query: 112 EIARLKAKPIE 122
E+ARL+ +E
Sbjct: 248 ELARLEKAKVE 258
>gi|298375067|ref|ZP_06985024.1| nuclease sbcCD subunit C [Bacteroides sp. 3_1_19]
gi|298267567|gb|EFI09223.1| nuclease sbcCD subunit C [Bacteroides sp. 3_1_19]
Length = 993
Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
Query: 54 LKNKDKYREYKRRYYLKNRDKMREKARQSYRKLYSKDSWI--APEEPMGMTKAEIEALER 111
L ++Y E RR ++KN + A+++Y +LY++ I EE + ++ + ALE
Sbjct: 193 LTGTEQYSEISRRIFVKNAE-----AKEAYEQLYARVQGIELLSEEEVEASQTRLSALEG 247
Query: 112 EIARLK 117
E+ARL+
Sbjct: 248 ELARLE 253
>gi|150008355|ref|YP_001303098.1| ATP-dependent exonuclease sbcC [Parabacteroides distasonis ATCC
8503]
gi|256839357|ref|ZP_05544866.1| ATP-dependent exonuclease sbcC [Parabacteroides sp. D13]
gi|149936779|gb|ABR43476.1| ATP-dependent exonuclease sbcC [Parabacteroides distasonis ATCC
8503]
gi|256738287|gb|EEU51612.1| ATP-dependent exonuclease sbcC [Parabacteroides sp. D13]
Length = 993
Score = 34.3 bits (77), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
Query: 54 LKNKDKYREYKRRYYLKNRDKMREKARQSYRKLYS--KDSWIAPEEPMGMTKAEIEALER 111
L ++Y E RR + KN + A+++Y +LY+ +D + EE + ++ + ALE
Sbjct: 193 LTGTEQYSEISRRIFAKNAE-----AKEAYEQLYARVQDIELLSEEEVEASQTRLSALEV 247
Query: 112 EIARLK 117
E+ARL+
Sbjct: 248 ELARLE 253
>gi|255015511|ref|ZP_05287637.1| ATP-dependent exonuclease sbcC [Bacteroides sp. 2_1_7]
Length = 993
Score = 34.3 bits (77), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
Query: 54 LKNKDKYREYKRRYYLKNRDKMREKARQSYRKLYS--KDSWIAPEEPMGMTKAEIEALER 111
L ++Y E RR + KN + A+++Y +LY+ +D + EE + ++ + ALE
Sbjct: 193 LTGTEQYSEISRRIFAKNAE-----AKEAYEQLYARVQDIELLSEEEVEASQTRLSALEV 247
Query: 112 EIARLK 117
E+ARL+
Sbjct: 248 ELARLE 253
>gi|229497039|ref|ZP_04390744.1| peptidase, M23/M37 family [Porphyromonas endodontalis ATCC 35406]
gi|229316141|gb|EEN82069.1| peptidase, M23/M37 family [Porphyromonas endodontalis ATCC 35406]
Length = 357
Score = 33.9 bits (76), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 41 NKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKMREKARQSYRKLYSKDSWIAPEEPMG 100
N D SY + + NK+K EYK+ +R++ +EKA Q++R + DS + + G
Sbjct: 274 NTDNSGPSYGELFANNKEKVTEYKQS--ANSRERAKEKAPQTHR-IKEGDSLSSIAKRHG 330
Query: 101 MTKAEIEALEREIARLKAKP 120
T A++ L A+ +P
Sbjct: 331 TTVAKLCKLNNMTAKATLRP 350
>gi|221103613|ref|XP_002170145.1| PREDICTED: similar to ATP-dependent DNA helicase PIF1 [Hydra
magnipapillata]
Length = 734
Score = 33.9 bits (76), Expect = 7.8, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 25/34 (73%)
Query: 10 ERMLCRREYKRRYYLKNRDKILERRRRRYLKNKD 43
+R C R+ ++++Y KN++KIL +R R Y+K ++
Sbjct: 613 KRRECERKREKKHYTKNKNKILYKRAREYIKGEN 646
>gi|309360547|emb|CAP31028.2| hypothetical protein CBG_11979 [Caenorhabditis briggsae AF16]
Length = 898
Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%)
Query: 33 RRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKMREKARQSYRKLYSKDSW 92
R RRYLK K RE Y +Y ++ K L N+D+ + Q+ +L++K
Sbjct: 185 RVYRRYLKINPKAREDYVEYLIERDQIDEAAKELTTLVNQDQNVSEKGQTSHQLWTKLCT 244
Query: 93 IAPEEPMGMTKAEIEALERE 112
+ E P+ + ++A+ R+
Sbjct: 245 LISENPVKIFSLNVDAIIRQ 264
>gi|268560714|ref|XP_002646274.1| Hypothetical protein CBG11979 [Caenorhabditis briggsae]
Length = 865
Score = 33.5 bits (75), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%)
Query: 36 RRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKMREKARQSYRKLYSKDSWIAP 95
RRYLK K RE Y +Y ++ K L N+D+ + Q+ +L++K +
Sbjct: 186 RRYLKINPKAREDYVEYLIERDQIDEAAKELTTLVNQDQNVSEKGQTSHQLWTKLCTLIS 245
Query: 96 EEPMGMTKAEIEALERE 112
E P+ + ++A+ R+
Sbjct: 246 ENPVKIFSLNVDAIIRQ 262
>gi|160885908|ref|ZP_02066911.1| hypothetical protein BACOVA_03913 [Bacteroides ovatus ATCC 8483]
gi|156108721|gb|EDO10466.1| hypothetical protein BACOVA_03913 [Bacteroides ovatus ATCC 8483]
Length = 197
Score = 33.5 bits (75), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 19/75 (25%)
Query: 22 YYLKNRDKILERRR-------------------RRYLKNKDKIRESYHQYYLKNKDKYRE 62
Y ++NRDK+L RR+ RRY NK+KI E +Y L +K + RE
Sbjct: 123 YRIRNRDKLLARRKELRNANIEHYRELERASYKRRYKVNKEKILEKNRKYQLAHKSEIRE 182
Query: 63 YKRRYYLKNRDKMRE 77
Y + YY KN+ K ++
Sbjct: 183 YMKVYYQKNKSKWKQ 197
>gi|167768327|ref|ZP_02440380.1| hypothetical protein CLOSS21_02883 [Clostridium sp. SS2/1]
gi|167709851|gb|EDS20430.1| hypothetical protein CLOSS21_02883 [Clostridium sp. SS2/1]
Length = 409
Score = 33.5 bits (75), Expect = 9.7, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 36/69 (52%)
Query: 24 LKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKMREKARQSY 83
+K D I R+ + + ++ ++Y +YY +N D Y + LK +++M + + +
Sbjct: 58 IKKTDDINHSRQAKNRNERKQLSKAYQEYYKENIDLYDKLDMTKILKQKEEMLQYHPKGF 117
Query: 84 RKLYSKDSW 92
K + KD++
Sbjct: 118 MKKFVKDNY 126
Searching..................................................done
Results from round 2
>gi|254781226|ref|YP_003065639.1| hypothetical protein CLIBASIA_05665 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040903|gb|ACT57699.1| hypothetical protein CLIBASIA_05665 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 129
Score = 143 bits (361), Expect = 7e-33, Method: Composition-based stats.
Identities = 129/129 (100%), Positives = 129/129 (100%)
Query: 1 MGRKVLTPEERMLCRREYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKY 60
MGRKVLTPEERMLCRREYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKY
Sbjct: 1 MGRKVLTPEERMLCRREYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKY 60
Query: 61 REYKRRYYLKNRDKMREKARQSYRKLYSKDSWIAPEEPMGMTKAEIEALEREIARLKAKP 120
REYKRRYYLKNRDKMREKARQSYRKLYSKDSWIAPEEPMGMTKAEIEALEREIARLKAKP
Sbjct: 61 REYKRRYYLKNRDKMREKARQSYRKLYSKDSWIAPEEPMGMTKAEIEALEREIARLKAKP 120
Query: 121 IEELIYKRG 129
IEELIYKRG
Sbjct: 121 IEELIYKRG 129
>gi|317120691|gb|ADV02514.1| hypothetical protein SC1_gp170 [Liberibacter phage SC1]
gi|317120835|gb|ADV02656.1| hypothetical protein SC1_gp170 [Candidatus Liberibacter asiaticus]
Length = 129
Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats.
Identities = 123/129 (95%), Positives = 126/129 (97%)
Query: 1 MGRKVLTPEERMLCRREYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKY 60
M RKVLTPEERMLCRREYKRRYYLKNRDKILERRRRRYLKNKDKI+E+ HQYYLKNKDKY
Sbjct: 1 MERKVLTPEERMLCRREYKRRYYLKNRDKILERRRRRYLKNKDKIKENNHQYYLKNKDKY 60
Query: 61 REYKRRYYLKNRDKMREKARQSYRKLYSKDSWIAPEEPMGMTKAEIEALEREIARLKAKP 120
REYKRRYYLKNRDKMREKARQSYRKLYSKDSWIAPEEPMGMTKAEIEALEREIARLKAKP
Sbjct: 61 REYKRRYYLKNRDKMREKARQSYRKLYSKDSWIAPEEPMGMTKAEIEALEREIARLKAKP 120
Query: 121 IEELIYKRG 129
IEELIYK+
Sbjct: 121 IEELIYKKA 129
>gi|317120733|gb|ADV02555.1| hypothetical protein SC2_gp170 [Liberibacter phage SC2]
gi|317120794|gb|ADV02615.1| hypothetical protein SC2_gp170 [Candidatus Liberibacter asiaticus]
Length = 129
Score = 140 bits (353), Expect = 6e-32, Method: Composition-based stats.
Identities = 123/129 (95%), Positives = 125/129 (96%)
Query: 1 MGRKVLTPEERMLCRREYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKY 60
M RKVLTPEERMLCRREYKRRYYLKNRDKILERRRRRYLKNKDKI+E HQYYLKNKDKY
Sbjct: 1 MERKVLTPEERMLCRREYKRRYYLKNRDKILERRRRRYLKNKDKIQEYSHQYYLKNKDKY 60
Query: 61 REYKRRYYLKNRDKMREKARQSYRKLYSKDSWIAPEEPMGMTKAEIEALEREIARLKAKP 120
REYKRRYYLKNRDKMREKARQSYRKLYSKDSWIAPEEPMGMTKAEIEALEREIARLKAKP
Sbjct: 61 REYKRRYYLKNRDKMREKARQSYRKLYSKDSWIAPEEPMGMTKAEIEALEREIARLKAKP 120
Query: 121 IEELIYKRG 129
IEELIYK+
Sbjct: 121 IEELIYKKA 129
>gi|157953109|ref|YP_001498001.1| hypothetical protein NY2A_B805R [Paramecium bursaria Chlorella
virus NY2A]
gi|155123336|gb|ABT15204.1| hypothetical protein NY2A_B805R [Paramecium bursaria Chlorella
virus NY2A]
Length = 340
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 49/68 (72%)
Query: 16 REYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKM 75
++Y+R+Y +N++ ILE+ R+ Y +NK++I+E QY +NK+ E R+YY +N++++
Sbjct: 21 KDYQRQYREENKEHILEKARQYYEENKEEIQEKKRQYREENKEHILEKARQYYEENKEEI 80
Query: 76 REKARQSY 83
+EK RQ Y
Sbjct: 81 QEKNRQYY 88
Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 11/73 (15%)
Query: 16 REYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYR-----------EYK 64
+E KR+Y +N++ ILE+ R+ Y +NK++I+E QYY NKDK R EYK
Sbjct: 51 QEKKRQYREENKEHILEKARQYYEENKEEIQEKNRQYYEDNKDKIRQYREDNKDKILEYK 110
Query: 65 RRYYLKNRDKMRE 77
R+YY NR+K+++
Sbjct: 111 RQYYEDNREKIQQ 123
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 43/61 (70%)
Query: 17 EYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKMR 76
E R+YY +N+++I E++R+ +NK+ I E QYY +NK++ +E R+YY N+DK+R
Sbjct: 37 EKARQYYEENKEEIQEKKRQYREENKEHILEKARQYYEENKEEIQEKNRQYYEDNKDKIR 96
Query: 77 E 77
+
Sbjct: 97 Q 97
Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 12 MLCRREYKRRYYLKNRDKILERRRRRYLK-NKDKIRESYHQYYLKNKDKYREYKRRYYLK 70
MLC R K L + + +R+Y + NK+ I E QYY +NK++ +E KR+Y +
Sbjct: 1 MLCIRCNKPHNELTKTCRPCKDYQRQYREENKEHILEKARQYYEENKEEIQEKKRQYREE 60
Query: 71 NRDKMREKARQSYRK 85
N++ + EKARQ Y +
Sbjct: 61 NKEHILEKARQYYEE 75
Score = 34.6 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 11/59 (18%)
Query: 17 EYKRRYYLKNRDKILERRRRRYLKNKDKIR-----------ESYHQYYLKNKDKYREYK 64
E R+YY +N+++I E+ R+ Y NKDKIR E QYY N++K ++Y+
Sbjct: 67 EKARQYYEENKEEIQEKNRQYYEDNKDKIRQYREDNKDKILEYKRQYYEDNREKIQQYR 125
>gi|157953770|ref|YP_001498661.1| hypothetical protein AR158_C580L [Paramecium bursaria Chlorella
virus AR158]
gi|156068418|gb|ABU44125.1| hypothetical protein AR158_C580L [Paramecium bursaria Chlorella
virus AR158]
Length = 310
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 43/70 (61%)
Query: 20 RRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKMREKA 79
R+Y N +KI ER R+R +N +K RE + KN +KYREY+R+Y + N +K +E
Sbjct: 29 RKYCTNNAEKIKERGRKRRAENPEKFRERDRKRREKNPEKYREYERKYRIANPEKFKEYE 88
Query: 80 RQSYRKLYSK 89
R+ + +Y K
Sbjct: 89 RKRHATIYRK 98
>gi|2947224|gb|AAC39306.1| ORF4 [Lactococcus phage phi31]
Length = 246
Score = 41.5 bits (96), Expect = 0.037, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 48/89 (53%)
Query: 13 LCRREYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNR 72
+CR+ + Y ++KILE+++R Y KN DKI+E YY +NK K R+ ++ + N
Sbjct: 65 VCRKAKDKARYEAKKEKILEQKKRYYEKNADKIKERQLGYYNENKGKCRQSEKDWCKNNP 124
Query: 73 DKMREKARQSYRKLYSKDSWIAPEEPMGM 101
+ R +S Y +S + +E + +
Sbjct: 125 TRRRMTCAKSRTLKYGSESTLTEKEWLEI 153
>gi|255947256|ref|XP_002564395.1| Pc22g03540 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591412|emb|CAP97642.1| Pc22g03540 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 669
Score = 41.1 bits (95), Expect = 0.050, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 38/68 (55%)
Query: 18 YKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKMRE 77
Y RRYY KN KI + R+ KN DKIR +Y KN D+ + R + KN DK++
Sbjct: 402 YSRRYYRKNAGKIKAKNRKYQRKNADKIRAKRREYERKNADRIKARLREWRRKNADKIKA 461
Query: 78 KARQSYRK 85
+ R+ RK
Sbjct: 462 RKREWRRK 469
Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 20 RRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKMREKA 79
R+Y KN DKI +RR KN D+I+ ++ KN DK + KR + KN DK++
Sbjct: 419 RKYQRKNADKIRAKRREYERKNADRIKARLREWRRKNADKIKARKREWRRKNADKIKANN 478
Query: 80 RQSYRK 85
R+ YR+
Sbjct: 479 REYYRE 484
Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 38/66 (57%)
Query: 20 RRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKMREKA 79
R + KN DKI R+R KN DKI+ + +YY +N D+ + R Y +N D+++ +
Sbjct: 449 REWRRKNADKIKARKREWRRKNADKIKANNREYYRENADRIKANNREYQRENADRIKARN 508
Query: 80 RQSYRK 85
R+ R+
Sbjct: 509 REYQRE 514
Score = 37.3 bits (85), Expect = 0.67, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 37/67 (55%)
Query: 19 KRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKMREK 78
KR + KN DKI R Y +N D+I+ + +Y +N D+ + R Y +N D+++ +
Sbjct: 463 KREWRRKNADKIKANNREYYRENADRIKANNREYQRENADRIKARNREYQRENADRIKAR 522
Query: 79 ARQSYRK 85
R+ R+
Sbjct: 523 NREYQRE 529
Score = 36.9 bits (84), Expect = 0.96, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 24 LKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKMREKARQSY 83
L+N D+ RR Y KN KI+ +Y KN DK R +R Y KN D+++ + R+
Sbjct: 393 LQNTDREDSYSRRYYRKNAGKIKAKNRKYQRKNADKIRAKRREYERKNADRIKARLREWR 452
Query: 84 RK 85
RK
Sbjct: 453 RK 454
Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 35/66 (53%)
Query: 20 RRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKMREKA 79
R YY +N D+I R +N D+I+ +Y +N D+ + R Y +N D+++ +
Sbjct: 479 REYYRENADRIKANNREYQRENADRIKARNREYQRENADRIKARNREYQRENADRIKARN 538
Query: 80 RQSYRK 85
R+ RK
Sbjct: 539 REYQRK 544
Score = 34.6 bits (78), Expect = 4.5, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 35/66 (53%)
Query: 20 RRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKMREKA 79
R Y +N D+I R R KN D+I S ++ KN D+ KR ++ KN D++ +
Sbjct: 524 REYQRENADRIKARNREYQRKNADRISASIQEWRRKNADRVSASKREWHRKNADRVNARQ 583
Query: 80 RQSYRK 85
R+ RK
Sbjct: 584 RERRRK 589
>gi|315121957|ref|YP_004062446.1| hypothetical protein CKC_01035 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|315122925|ref|YP_004063414.1| hypothetical protein CKC_05905 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495359|gb|ADR51958.1| hypothetical protein CKC_01035 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496327|gb|ADR52926.1| hypothetical protein CKC_05905 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 31
Score = 40.0 bits (92), Expect = 0.097, Method: Composition-based stats.
Identities = 25/31 (80%), Positives = 27/31 (87%)
Query: 99 MGMTKAEIEALEREIARLKAKPIEELIYKRG 129
M MTK EIEALE +IARLKAKP+EELIYKR
Sbjct: 1 MEMTKGEIEALEAKIARLKAKPLEELIYKRA 31
>gi|9632057|ref|NP_048846.1| hypothetical protein PBCV1_A490L [Paramecium bursaria Chlorella
virus 1]
gi|1620161|gb|AAC96857.1| Lys-, Glu-rich [Paramecium bursaria Chlorella virus 1]
Length = 310
Score = 40.0 bits (92), Expect = 0.097, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 43/65 (66%)
Query: 16 REYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKM 75
RE+ ++ Y K+ +K ER+R+ +N DK RE + Y ++ +K+REY R+Y+ ++ +K
Sbjct: 25 REWDKKRYAKDPEKFRERKRKEREENIDKFRERARERYAEDPEKFREYDRKYHAEDPEKK 84
Query: 76 REKAR 80
RE+ R
Sbjct: 85 RERNR 89
>gi|157953051|ref|YP_001497943.1| hypothetical protein NY2A_B747L [Paramecium bursaria Chlorella
virus NY2A]
gi|155123278|gb|ABT15146.1| hypothetical protein NY2A_B747L [Paramecium bursaria Chlorella
virus NY2A]
Length = 309
Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 43/73 (58%)
Query: 16 REYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKM 75
REY+ Y KN++K+ + ++ Y +NK+ +++ + Y +NKD + + Y +N++ +
Sbjct: 9 REYQEEYRTKNKEKLQQNKKDYYQQNKELLKKKRNDRYHQNKDVILQQQNEYCQQNKEMI 68
Query: 76 REKARQSYRKLYS 88
++ R+ LY+
Sbjct: 69 KKNQRKRNDILYT 81
>gi|218188462|gb|EEC70889.1| hypothetical protein OsI_02427 [Oryza sativa Indica Group]
Length = 1477
Score = 37.7 bits (86), Expect = 0.51, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 15 RREYKRRYYLKNRDKI--LERRRRRYLKNKDKIRESYHQYYL----KNKDKYREYKRRYY 68
R+ Y R L R+++ L+R R +LK D+ + +H+ KNK + + Y
Sbjct: 564 RKLYARLDELLYREEMMWLQRSRVSWLKEGDRNTKFFHRQAAWRAKKNKINRLKDEDSRY 623
Query: 69 LKNRDKMREKARQSYRKLYSKDSWIAPEEPMGMTKAEIEA 108
++N+ M + R ++KLY++D + P E + + ++A
Sbjct: 624 VENKGDMEKLTRDFFQKLYARDEGVDPGELVDLFDVRVDA 663
>gi|222624901|gb|EEE59033.1| hypothetical protein OsJ_10782 [Oryza sativa Japonica Group]
Length = 850
Score = 37.7 bits (86), Expect = 0.55, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 10/95 (10%)
Query: 9 EERMLCRREYKRRYYLKNRDKI--LERRRRRYLKNKDKIRESYHQYYL----KNKDKYRE 62
E RML Y R L R++I L+R R +LK D+ + +H+ KNK +
Sbjct: 40 EIRML----YARMDELLYREEIMWLQRSRVAWLKEGDRNTKFFHRQAAWRSKKNKITRLK 95
Query: 63 YKRRYYLKNRDKMREKARQSYRKLYSKDSWIAPEE 97
+ +++N+++M AR+ ++ LY KD+ + P E
Sbjct: 96 AEDSRFVENKEEMEHMAREFFQTLYLKDNSVDPRE 130
>gi|167044410|gb|ABZ09087.1| hypothetical protein ALOHA_HF4000APKG6D3ctg6g4 [uncultured marine
crenarchaeote HF4000_APKG6D3]
Length = 308
Score = 37.7 bits (86), Expect = 0.58, Method: Composition-based stats.
Identities = 33/74 (44%), Positives = 49/74 (66%)
Query: 5 VLTPEERMLCRREYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYK 64
VL+ EER RRE R++ +N +KI E R+ KN +KI E+ +Y +N +K RE +
Sbjct: 2 VLSDEERKRKRRELTRKWKKENPEKIREGGRKYRAKNPEKISEAKKKYNRENPEKVREKR 61
Query: 65 RRYYLKNRDKMREK 78
R+YY +NR+K+REK
Sbjct: 62 RKYYEENREKIREK 75
Score = 37.3 bits (85), Expect = 0.65, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 53/88 (60%)
Query: 2 GRKVLTPEERMLCRREYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYR 61
+++ EE +E + ++Y +NR+KI ERRR+ Y +N +KI E + Y KN +K
Sbjct: 74 EKQIKYLEENPEKIKEARSKHYEENREKINERRRKDYEENHEKINERRRKDYKKNPEKIN 133
Query: 62 EYKRRYYLKNRDKMREKARQSYRKLYSK 89
E +R+Y +N +K+RE R+ Y K + K
Sbjct: 134 ERRRKYRKENPEKVRESKRKDYEKNHEK 161
Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 50/70 (71%)
Query: 16 REYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKM 75
RE +R+YY +NR+KI E++ + +N +KI+E+ ++Y +N++K E +R+ Y +N +K+
Sbjct: 58 REKRRKYYEENREKIREKQIKYLEENPEKIKEARSKHYEENREKINERRRKDYEENHEKI 117
Query: 76 REKARQSYRK 85
E+ R+ Y+K
Sbjct: 118 NERRRKDYKK 127
Score = 35.4 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 50/73 (68%)
Query: 17 EYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKMR 76
E K++Y +N +K+ E+RR+ Y +N++KIRE +Y +N +K +E + ++Y +NR+K+
Sbjct: 44 EAKKKYNRENPEKVREKRRKYYEENREKIREKQIKYLEENPEKIKEARSKHYEENREKIN 103
Query: 77 EKARQSYRKLYSK 89
E+ R+ Y + + K
Sbjct: 104 ERRRKDYEENHEK 116
Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 44/65 (67%)
Query: 17 EYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKMR 76
E +R+ Y +N +KI ERRR+ Y KN +KI E +Y +N +K RE KR+ Y KN +K++
Sbjct: 104 ERRRKDYEENHEKINERRRKDYKKNPEKINERRRKYRKENPEKVRESKRKDYEKNHEKIK 163
Query: 77 EKARQ 81
E+ ++
Sbjct: 164 ERVKK 168
>gi|295399960|ref|ZP_06809940.1| conserved hypothetical protein [Geobacillus thermoglucosidasius
C56-YS93]
gi|312110792|ref|YP_003989108.1| hypothetical protein GY4MC1_1723 [Geobacillus sp. Y4.1MC1]
gi|294977739|gb|EFG53337.1| conserved hypothetical protein [Geobacillus thermoglucosidasius
C56-YS93]
gi|311215893|gb|ADP74497.1| hypothetical protein GY4MC1_1723 [Geobacillus sp. Y4.1MC1]
Length = 574
Score = 37.3 bits (85), Expect = 0.74, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 36 RRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKMREKARQ-SYRKLYSKDSWIA 94
+R ++ + ++Y YY K + +EYK+ YYL RD+ RQ ++R L + D +
Sbjct: 437 KRMIRQYNVPSKAYFSYY-KPILESKEYKKNYYLLLRDQGYSPIRQVTFRHLETGDKTLT 495
Query: 95 PEEPMGMTKAEIEALEREIARLKAKPIEEL 124
EP + + +EAL+ ++ A + EL
Sbjct: 496 IIEPQQI-DSFVEALKADLMEESASTMLEL 524
>gi|108708055|gb|ABF95850.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 940
Score = 37.3 bits (85), Expect = 0.78, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 10/95 (10%)
Query: 9 EERMLCRREYKRRYYLKNRDKI--LERRRRRYLKNKDKIRESYHQYYL----KNKDKYRE 62
E RML Y R L R++I L+R R +LK D+ + +H+ KNK +
Sbjct: 40 EIRML----YARMDELLYREEIMWLQRSRVAWLKEGDRNTKFFHRQAAWRSKKNKITRLK 95
Query: 63 YKRRYYLKNRDKMREKARQSYRKLYSKDSWIAPEE 97
+ +++N+++M AR+ ++ LY KD+ + P E
Sbjct: 96 AEDSRFVENKEEMEHMAREFFQTLYLKDNSVDPRE 130
>gi|170676322|ref|YP_001742083.1| putative endonuclease protein [Salmonella phage E1]
gi|170321632|emb|CAM33151.1| phage endonuclease protein [Salmonella phage Vi II-E1]
Length = 334
Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 14 CRREYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRY-YLKNR 72
C+ E+++ Y + +I E+ +R Y KNK+K E Q+ KNK R ++R+Y YLK +
Sbjct: 208 CQAEFRKNIYKLKKAEINEKSKRYYDKNKEKHNEKSKQWRQKNKGVVRYHQRKYKYLKRQ 267
>gi|169628899|ref|YP_001702548.1| bacteriophage protein [Mycobacterium abscessus ATCC 19977]
gi|169240866|emb|CAM61894.1| Bacteriophage protein [Mycobacterium abscessus]
Length = 215
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 23 YLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRD 73
Y ++R+K L R RR N ++ E+ +YY NK + R + +RYY N+D
Sbjct: 70 YKRDREKFLARNRRWRADNYERELETNRKYYHDNKAQVRAWHKRYYEANKD 120
>gi|218192800|gb|EEC75227.1| hypothetical protein OsI_11496 [Oryza sativa Indica Group]
Length = 1059
Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 10/95 (10%)
Query: 9 EERMLCRREYKRRYYLKNRDKI--LERRRRRYLKNKDKIRESYHQYYL----KNKDKYRE 62
E RML Y R L R+++ L+R R +LK D+ + +H+ KNK +
Sbjct: 75 EIRML----YARMDELLYREEMMWLQRSRVAWLKEGDRNTKFFHRQAAWRSKKNKITRLK 130
Query: 63 YKRRYYLKNRDKMREKARQSYRKLYSKDSWIAPEE 97
+ +++N+++M AR+ ++ LY KD+ + P E
Sbjct: 131 AEDSRFVENKEEMEHMAREFFQTLYLKDNSVDPRE 165
>gi|315121958|ref|YP_004062447.1| hypothetical protein CKC_01040 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|315122926|ref|YP_004063415.1| hypothetical protein CKC_05910 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495360|gb|ADR51959.1| hypothetical protein CKC_01040 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496328|gb|ADR52927.1| hypothetical protein CKC_05910 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 209
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 43/69 (62%)
Query: 17 EYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKMR 76
EY R+Y KNRDK+ E +R + K++ E QYY NK+ EY+R+Y KN+DK+
Sbjct: 30 EYYRQYQQKNRDKLTENKRLYRQRKKEERNEYQRQYYQNNKEARIEYQRQYLQKNKDKIN 89
Query: 77 EKARQSYRK 85
E RQ Y+K
Sbjct: 90 EYYRQHYQK 98
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 32/79 (40%), Positives = 46/79 (58%)
Query: 2 GRKVLTPEERMLCRREYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYR 61
K L + + R EY+R+YY N++ +E +R+ KNKDKI E Y Q+Y KNKDK
Sbjct: 45 ENKRLYRQRKKEERNEYQRQYYQNNKEARIEYQRQYLQKNKDKINEYYRQHYQKNKDKLT 104
Query: 62 EYKRRYYLKNRDKMREKAR 80
E R+YY + ++ E R
Sbjct: 105 ENSRQYYQRKKEARIEYQR 123
Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 43/67 (64%)
Query: 15 RREYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDK 74
R EY+R+Y KN+DKI E R+ Y KNKDK+ E+ QYY + K+ EY+R Y + +++
Sbjct: 73 RIEYQRQYLQKNKDKINEYYRQHYQKNKDKLTENSRQYYQRKKEARIEYQRLYRQRKKEE 132
Query: 75 MREKARQ 81
+ RQ
Sbjct: 133 RKAYRRQ 139
>gi|315185937|gb|EFU19701.1| permease YjgP/YjgQ family protein [Spirochaeta thermophila DSM
6578]
Length = 424
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 24 LKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKN----RDKMREKA 79
+K R+++LE++RR + K +D +R S YL E R +L N ++REK
Sbjct: 262 MKEREQVLEQKRRSHEKERDDLRRSVSSLYLTTLSLSNESIRSRFLGNLRSSLQRLREKE 321
Query: 80 R 80
R
Sbjct: 322 R 322
>gi|254563699|ref|YP_003070794.1| DNA helicase-like protein [Methylobacterium extorquens DM4]
gi|254270977|emb|CAX26983.1| putative DNA helicase related protein [Methylobacterium extorquens
DM4]
Length = 1938
Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 12/72 (16%)
Query: 70 KNRDKMREKARQSY----RKLYSKDSWIAPEEPMGMTKAEIEALEREI--------ARLK 117
++RD++R+ + + +++S D + PEE + T A IEA + E+ AR +
Sbjct: 1663 RDRDRLRQAVLEDHGWIIHRIWSTDWFQRPEEQLERTVAAIEAAKAELDARLEFGGARAR 1722
Query: 118 AKPIEELIYKRG 129
A P+E + +R
Sbjct: 1723 AVPVEVVTIERA 1734
>gi|237741330|ref|ZP_04571811.1| surface-layer protein [Fusobacterium sp. 4_1_13]
gi|229430862|gb|EEO41074.1| surface-layer protein [Fusobacterium sp. 4_1_13]
Length = 1498
Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 39/161 (24%)
Query: 2 GRKVLTPEERMLCRREYKRRYYLKNRDKILERRRRRYLKN----------KDKIRESYHQ 51
+ LT E + EY++ + +N+ K LE++ KN KD ++E+ +
Sbjct: 507 EKNFLTQENAEWNKYEYEKEHESENKIKELEKKIAEKNKNILEAKKNSIPKDILKEAGNY 566
Query: 52 Y---YLKNKDK--------YREYKRRYYLKNRDKMREKARQSYRKLYSKDSWIAPEEPMG 100
Y Y+ N+ K Y + KR L+ K E+ R+ Y+ + +++ PE P
Sbjct: 567 YLNKYIPNEIKNKKNEIGAYGDPKRDEKLRKEIKELEEKREKYKNIPAEN---IPEAP-E 622
Query: 101 MTKAEIEALEREIA--------------RLKAKPIEELIYK 127
K I +LE+EI R KAK EE I K
Sbjct: 623 SIKYLISSLEKEIEKDKKLLRQFKDTGMRTKAKEKEEEIAK 663
>gi|294784092|ref|ZP_06749393.1| 168 kDa surface-layer protein [Fusobacterium sp. 3_1_27]
gi|294488162|gb|EFG35507.1| 168 kDa surface-layer protein [Fusobacterium sp. 3_1_27]
Length = 1498
Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 39/161 (24%)
Query: 2 GRKVLTPEERMLCRREYKRRYYLKNRDKILERRRRRYLKN----------KDKIRESYHQ 51
+ LT E + EY++ + +N+ K LE++ KN KD ++E+ +
Sbjct: 507 EKNFLTQENAEWNKYEYEKEHESENKIKELEKKIAEKNKNILEAKKNSIPKDILKEAGNY 566
Query: 52 Y---YLKNKDK--------YREYKRRYYLKNRDKMREKARQSYRKLYSKDSWIAPEEPMG 100
Y Y+ N+ K Y + KR L+ K E+ R+ Y+ + +++ PE P
Sbjct: 567 YLNKYIPNEIKNKKNEIGAYGDPKRDEKLRKEIKELEEKREKYKNIPAEN---IPEAP-E 622
Query: 101 MTKAEIEALEREIA--------------RLKAKPIEELIYK 127
K I +LE+EI R KAK EE I K
Sbjct: 623 SIKYLISSLEKEIEKDKKLLRQFKDTGMRTKAKEKEEEIAK 663
>gi|301625882|ref|XP_002942130.1| PREDICTED: hypothetical protein LOC100486353 [Xenopus (Silurana)
tropicalis]
Length = 2359
Score = 35.4 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Query: 16 REYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKY-REYKRRYYLKNRDK 74
R YK+RY L+ ER RRY K + + Y Q Y +++Y R YK+RY L+
Sbjct: 2258 RRYKQRYKLRYDQGYRERYSRRY---KQRYKLRYDQGY---RERYSRRYKQRYKLRYDQG 2311
Query: 75 MREKARQSYRKLY 87
RE+ + Y++ Y
Sbjct: 2312 YRERYSRRYKQRY 2324
Score = 35.0 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 16 REYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKY-REYKRRYYLKNRDK 74
R YK+RY L+ ER RRY K + + Y Q Y +++Y R YK+RY L+
Sbjct: 2278 RRYKQRYKLRYDQGYRERYSRRY---KQRYKLRYDQGY---RERYSRRYKQRYKLRYDQG 2331
Query: 75 MREKARQSYRKLYSKD 90
RE+ + Y+ Y ++
Sbjct: 2332 YRERYSRRYKLRYDQE 2347
Score = 33.4 bits (75), Expect = 10.0, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 15 RREYKRRYYLKNRDKILERRRRRY-LKNKDKIRESY-HQYYLKNKDKYRE-YKRRYYLKN 71
+ Y RRY L+ ER RRY L+ +E Y +Y L+ + Y+E Y RRY L+
Sbjct: 2117 KERYSRRYKLRYEQGYKERYSRRYKLRYDQGYKERYSRRYKLRYEQGYKERYSRRYKLRY 2176
Query: 72 RDKMREKARQSYRKLYSK 89
+E+ + Y+ Y +
Sbjct: 2177 DQGYKERYSRRYKLRYDQ 2194
>gi|221103613|ref|XP_002170145.1| PREDICTED: similar to ATP-dependent DNA helicase PIF1 [Hydra
magnipapillata]
Length = 734
Score = 35.4 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 10 ERMLCRREYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYL 69
+R C R+ ++++Y KN++KIL +R R Y+K E++ ++Y + E++ + L
Sbjct: 613 KRRECERKREKKHYTKNKNKILYKRAREYIKG-----ENHDEWYGECGKHNEEFQDVFEL 667
Query: 70 KNRD 73
D
Sbjct: 668 LRSD 671
>gi|160885908|ref|ZP_02066911.1| hypothetical protein BACOVA_03913 [Bacteroides ovatus ATCC 8483]
gi|156108721|gb|EDO10466.1| hypothetical protein BACOVA_03913 [Bacteroides ovatus ATCC 8483]
Length = 197
Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 19/77 (24%)
Query: 20 RRYYLKNRDKILERRR-------------------RRYLKNKDKIRESYHQYYLKNKDKY 60
+ Y ++NRDK+L RR+ RRY NK+KI E +Y L +K +
Sbjct: 121 KAYRIRNRDKLLARRKELRNANIEHYRELERASYKRRYKVNKEKILEKNRKYQLAHKSEI 180
Query: 61 REYKRRYYLKNRDKMRE 77
REY + YY KN+ K ++
Sbjct: 181 REYMKVYYQKNKSKWKQ 197
>gi|307718798|ref|YP_003874330.1| hypothetical protein STHERM_c11120 [Spirochaeta thermophila DSM
6192]
gi|306532523|gb|ADN02057.1| hypothetical protein STHERM_c11120 [Spirochaeta thermophila DSM
6192]
Length = 424
Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 24 LKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKMREKARQSY 83
+K R+++LE++RR + K +D +R S + YL E R +L + ++ RQ
Sbjct: 262 MKEREQVLEQKRRSHEKERDDLRRSVSRLYLTTLSLSNESIRSRFLGSLRSSLQRLRQKE 321
Query: 84 R 84
R
Sbjct: 322 R 322
>gi|238776850|ref|NP_001154919.1| nipped-B-like protein [Danio rerio]
Length = 2856
Score = 35.0 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 15/62 (24%)
Query: 25 KNRDKILERRRRRYL-KNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKMREKARQSY 83
KN+DK LE+ R + K++DK+RE K++DK RE K+RDK+REK R+
Sbjct: 790 KNQDKELEKDRDKVRDKDRDKVRE-------KDRDKVRE-------KDRDKLREKDREKI 835
Query: 84 RK 85
R+
Sbjct: 836 RE 837
>gi|307187162|gb|EFN72405.1| Death-inducer obliterator 1 [Camponotus floridanus]
Length = 2322
Score = 35.0 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 25 KNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKMREKARQSYR 84
K RDK ER+ R +DK RE + KDK R+ + +R + RE+ RQ +
Sbjct: 1541 KTRDKSKERKSRNKESRRDKDRE-------REKDKDRDRNKDRDKTSRKESRERGRQKEK 1593
Query: 85 KLY-SKDSWI 93
+ S DSW+
Sbjct: 1594 DRHKSSDSWM 1603
>gi|82915119|ref|XP_728968.1| ubiquitin carboxyl-terminal hydrolase [Plasmodium yoelii yoelii
str. 17XNL]
gi|23485702|gb|EAA20533.1| Ubiquitin carboxyl-terminal hydrolase family 2, putative
[Plasmodium yoelii yoelii]
Length = 2033
Score = 34.2 bits (77), Expect = 5.5, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 43 DKIRESYHQY-YLKNKDKYREYKR-RYYLKNRDKMREKARQSYRKLYSKDSWI 93
D IR +Y Q L+N+DKY + KR R+ K++DK REK R YR S ++I
Sbjct: 19 DVIRTNYSQNNILRNRDKYIDEKRGRHNGKDKDKFREKDRMKYRDKISYTNYI 71
>gi|302693336|ref|XP_003036347.1| hypothetical protein SCHCODRAFT_81569 [Schizophyllum commune H4-8]
gi|300110043|gb|EFJ01445.1| hypothetical protein SCHCODRAFT_81569 [Schizophyllum commune H4-8]
Length = 1937
Score = 34.2 bits (77), Expect = 5.8, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 17 EYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLK--NRD 73
E +RR +K+RD+ ER +R +++N+D+ + +Y ++ R+Y+ R Y + NRD
Sbjct: 500 ELERR--IKDRDERKEREKREWIRNRDRANQGSGRYRDRDDSYGRDYESRPYSRGANRD 556
>gi|148229035|ref|NP_001086537.1| chromosome 3 open reading frame 63 [Xenopus laevis]
gi|49903384|gb|AAH76767.1| MGC83207 protein [Xenopus laevis]
Length = 1094
Score = 34.2 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 28 DKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKMR-EKARQSY 83
+ ++E+ R YLK + +I +Y LK D +YK+ Y+ R+K E A +SY
Sbjct: 34 NDVVEKHSRVYLKRRAEIPHKSKEYILKPYDSRLDYKKSLYVAPRNKGHIESALRSY 90
>gi|75253936|sp|Q67VD7|BURP9_ORYSJ RecName: Full=BURP domain-containing protein 9; Short=OsBURP09;
Flags: Precursor
gi|51535170|dbj|BAD37882.1| putative dehydration-responsive protein [Oryza sativa Japonica
Group]
Length = 515
Score = 33.8 bits (76), Expect = 7.1, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 18/112 (16%)
Query: 1 MGRKVLTPEERMLCRREYKRR-YYLKNR------DKILERRRRRYLKNKDKIRESYHQ-- 51
M + L E + R + KR+ YL N D+ +E+ YL NKD+ ++ Q
Sbjct: 89 MEKFYLYHEGKTNDRDDQKRKNIYLYNEGHANGDDQTMEKF---YLFNKDQAKDGDDQKM 145
Query: 52 --YYLKNKDKYREYK----RRYYLKNRDKMREKARQSYRKLYSKDSWIAPEE 97
+YL NKD+ ++ R+YL N+ E Q+ K Y + A EE
Sbjct: 146 GKFYLYNKDQANDWDDQKMERFYLYNKGHANEGDDQTMEKFYLYNKGHANEE 197
>gi|167768327|ref|ZP_02440380.1| hypothetical protein CLOSS21_02883 [Clostridium sp. SS2/1]
gi|167709851|gb|EDS20430.1| hypothetical protein CLOSS21_02883 [Clostridium sp. SS2/1]
Length = 409
Score = 33.8 bits (76), Expect = 7.4, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 43/84 (51%)
Query: 24 LKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYREYKRRYYLKNRDKMREKARQSY 83
+K D I R+ + + ++ ++Y +YY +N D Y + LK +++M + + +
Sbjct: 58 IKKTDDINHSRQAKNRNERKQLSKAYQEYYKENIDLYDKLDMTKILKQKEEMLQYHPKGF 117
Query: 84 RKLYSKDSWIAPEEPMGMTKAEIE 107
K + KD++ ++ + K++ E
Sbjct: 118 MKKFVKDNYEHLQKRVEEIKSDKE 141
>gi|222635287|gb|EEE65419.1| hypothetical protein OsJ_20766 [Oryza sativa Japonica Group]
Length = 447
Score = 33.8 bits (76), Expect = 8.1, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 18/112 (16%)
Query: 1 MGRKVLTPEERMLCRREYKRR-YYLKNR------DKILERRRRRYLKNKDKIRESYHQ-- 51
M + L E + R + KR+ YL N D+ +E+ YL NKD+ ++ Q
Sbjct: 21 MEKFYLYHEGKTNDRDDQKRKNIYLYNEGHANGDDQTMEKF---YLFNKDQAKDGDDQKM 77
Query: 52 --YYLKNKDKYREYK----RRYYLKNRDKMREKARQSYRKLYSKDSWIAPEE 97
+YL NKD+ ++ R+YL N+ E Q+ K Y + A EE
Sbjct: 78 GKFYLYNKDQANDWDDQKMERFYLYNKGHANEGDDQTMEKFYLYNKGHANEE 129
>gi|46125097|ref|XP_387102.1| hypothetical protein FG06926.1 [Gibberella zeae PH-1]
Length = 2022
Score = 33.8 bits (76), Expect = 8.7, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 15/105 (14%)
Query: 29 KILERRRRRYLKNKDK-------IRESYHQYYLKNKDKYREYKRRYYLKNRDKMREKARQ 81
+I ERR+ + + +K+K +RE + + K ++KYR R+ K R++ + KA +
Sbjct: 1885 RIEERRQSKLVGDKEKDATMLAKLREKHEKEVAKQEEKYRREMRKLEEK-RERDQRKAEE 1943
Query: 82 SYRKLYSKDSWIAPEEPMGMTKAE-------IEALEREIARLKAK 119
RK ++ + +AE IE LE ++ L+A+
Sbjct: 1944 RRRKAAEQEEKNKLSLELERVRAERDVAQRQIELLEGQVGELQAQ 1988
>gi|118580982|ref|YP_902232.1| SMC domain-containing protein [Pelobacter propionicus DSM 2379]
gi|118503692|gb|ABL00175.1| SMC domain protein [Pelobacter propionicus DSM 2379]
Length = 1230
Score = 33.8 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 40/89 (44%)
Query: 2 GRKVLTPEERMLCRREYKRRYYLKNRDKILERRRRRYLKNKDKIRESYHQYYLKNKDKYR 61
R +L ER LC RE + R +R ++E+R RY + E L+ DK R
Sbjct: 839 QRALLAETERALCDREQQLREMTAHRGALVEQRLERYGERDPDKEEKRLADALRQADKRR 898
Query: 62 EYKRRYYLKNRDKMREKARQSYRKLYSKD 90
E R + +D++ +Q R S+D
Sbjct: 899 EQALREQSRLQDELGGLKQQIERMTSSRD 927
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.313 0.141 0.414
Lambda K H
0.267 0.0411 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,374,876,069
Number of Sequences: 14124377
Number of extensions: 93694990
Number of successful extensions: 527534
Number of sequences better than 10.0: 1702
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 2796
Number of HSP's that attempted gapping in prelim test: 513457
Number of HSP's gapped (non-prelim): 13509
length of query: 129
length of database: 4,842,793,630
effective HSP length: 95
effective length of query: 34
effective length of database: 3,500,977,815
effective search space: 119033245710
effective search space used: 119033245710
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.4 bits)
S2: 75 (33.5 bits)