HHsearch alignment for GI: 255764460 and conserved domain: COG1204
>COG1204 Superfamily II helicase [General function prediction only].
Probab=95.67 E-value=0.036 Score=33.32 Aligned_cols=97 Identities=30% Similarity=0.418 Sum_probs=61.4
Q ss_pred HHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHC-CCEEEEEECCCCCCHH------HHHHHCCCHH-----
Q ss_conf 789997238972688079997068723789999998752008-9879999738855668------8998198833-----
Q gi|255764460|r 53 LGLDIALGIGGFPKGRIVEIYGPESSGKTTLALHTIAQSQKT-GGTCAFVDAEHALDSI------YARKLGVDLK----- 120 (363)
Q Consensus 53 ~~lD~~Lg~GG~p~Gri~ei~G~~~sGKTtlal~~~a~~qk~-g~~~~~iD~E~~~~~~------~a~~~Gvd~~----- 120 (363)
T Consensus 34 ~~qq~av-~~~~~~~~N~li~aPTgsGKTlIA~lai~~~l~~~~~k~vYivPlkALa~Ek~~~~~~~~~~GirV~~~TgD 112 (766)
T COG1204 34 NPQQEAV-EKGLLSDENVLISAPTGSGKTLIALLAILSTLLEGGGKVVYIVPLKALAEEKYEEFSRLEELGIRVGISTGD 112 (766)
T ss_pred HHHHHHH-HCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHCCCEEEEECCC
T ss_conf 7899874-111257986799767888669999999999998559838999075999999999866688659779996488
Q ss_pred ----H-------EEEEECCCHHHHHHHHHHHHHC-----CCCCEEEEECCCCC
Q ss_conf ----4-------4897258489999999999744-----89768998143332
Q gi|255764460|r 121 ----N-------LLISQPDTGEQALEITDMLVRS-----GAVDIIVIDSVAAL 157 (363)
Q Consensus 121 ----~-------l~~~~~~~~E~~~~i~~~li~~-----~~~~liViDSi~al 157 (363)
T Consensus 113 ~~~~~~~l~~~~ViVt---T~EK~----Dsl~R~~~~~~~~V~lvViDEiH~l 158 (766)
T COG1204 113 YDLDDERLARYDVIVT---TPEKL----DSLTRKRPSWIEEVDLVVIDEIHLL 158 (766)
T ss_pred CCCCHHHHCCCCEEEE---CHHHH----HHHHHCCCCHHHCCCEEEEEEEEEC
T ss_conf 6555334145887997---46786----6765067533340168999421014