HHsearch alignment for GI: 255764460 and conserved domain: COG2255
>COG2255 RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair].
Probab=96.09 E-value=0.011 Score=36.52 Aligned_cols=80 Identities=30% Similarity=0.388 Sum_probs=41.1
Q ss_pred HHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCHHHEEEEECCCHHHH
Q ss_conf 89997238972688079997068723789999998752008987999973885566889981988334489725848999
Q gi|255764460|r 54 GLDIALGIGGFPKGRIVEIYGPESSGKTTLALHTIAQSQKTGGTCAFVDAEHALDSIYARKLGVDLKNLLISQPDTGEQA 133 (363)
Q Consensus 54 ~lD~~Lg~GG~p~Gri~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~iD~E~~~~~~~a~~~Gvd~~~l~~~~~~~~E~~ 133 (363)
T Consensus 41 fI~AAk~-r~e~lD-HvLl~GPPGlGKTTLA-~IIA~Emgvn--------------------------~k~tsGp~leK~ 91 (332)
T COG2255 41 FIKAAKK-RGEALD-HVLLFGPPGLGKTTLA-HIIANELGVN--------------------------LKITSGPALEKP 91 (332)
T ss_pred HHHHHHH-CCCCCC-EEEEECCCCCCHHHHH-HHHHHHHCCC--------------------------EEECCCCCCCCH
T ss_conf 9999984-498767-4786479987688899-9999985677--------------------------376366201572
Q ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCHHH
Q ss_conf 99999997448976899814333220265
Q gi|255764460|r 134 LEITDMLVRSGAVDIIVIDSVAALTPRAE 162 (363)
Q Consensus 134 ~~i~~~li~~~~~~liViDSi~al~p~~E 162 (363)
T Consensus 92 gDlaaiLt~Le~~DVLFIDEIHrl~~~vE 120 (332)
T COG2255 92 GDLAAILTNLEEGDVLFIDEIHRLSPAVE 120 (332)
T ss_pred HHHHHHHHCCCCCCEEEEEHHHHCCHHHH
T ss_conf 65999986398677677725531474289