HHsearch alignment for GI: 255764460 and conserved domain: PRK00440

>PRK00440 rfc replication factor C small subunit; Reviewed.
Probab=96.33  E-value=0.042  Score=32.90  Aligned_cols=81  Identities=25%  Similarity=0.301  Sum_probs=43.7

Q ss_pred             HHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCC--CEEEEEECCCCCCHHHHHHHCCCHHHEEEEECCCHHH
Q ss_conf             99972389726880799970687237899999987520089--8799997388556688998198833448972584899
Q gi|255764460|r   55 LDIALGIGGFPKGRIVEIYGPESSGKTTLALHTIAQSQKTG--GTCAFVDAEHALDSIYARKLGVDLKNLLISQPDTGEQ  132 (363)
Q Consensus        55 lD~~Lg~GG~p~Gri~ei~G~~~sGKTtlal~~~a~~qk~g--~~~~~iD~E~~~~~~~a~~~Gvd~~~l~~~~~~~~E~  132 (363)
T Consensus        28 L~~~i~~~~~ph---lLf~GppG~GKTt~a~~la~~l~~~~~~~~~lelnas---d-----~r~id-------------~   83 (318)
T PRK00440         28 LKSFVKEKNMPH---LLFAGPPGTGKTTAALALARELYGEYWRENFLELNAS---D-----ERGID-------------V   83 (318)
T ss_pred             HHHHHHCCCCCE---EEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCC---C-----CCCHH-------------H
T ss_conf             999998799866---9888959988999999999997698643476895164---5-----66717-------------8


Q ss_pred             HHHHHHHHHHC-----CCCCEEEEECCCCCCC
Q ss_conf             99999999744-----8976899814333220
Q gi|255764460|r  133 ALEITDMLVRS-----GAVDIIVIDSVAALTP  159 (363)
Q Consensus       133 ~~~i~~~li~~-----~~~~liViDSi~al~p  159 (363)
T Consensus        84 vr~~i~~~~~~~~~~~~~~kiiiiDE~d~l~~  115 (318)
T PRK00440         84 IRNKIKEFARTAPVGGAPFKIIFLDEADNLTS  115 (318)
T ss_pred             HHHHHHHHHHHCCCCCCCEEEEEEECCCCCCH
T ss_conf             99999999972677899738999868553225