HHsearch alignment for GI: 255764460 and conserved domain: PRK00440
>PRK00440 rfc replication factor C small subunit; Reviewed.
Probab=96.33 E-value=0.042 Score=32.90 Aligned_cols=81 Identities=25% Similarity=0.301 Sum_probs=43.7
Q ss_pred HHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCC--CEEEEEECCCCCCHHHHHHHCCCHHHEEEEECCCHHH
Q ss_conf 99972389726880799970687237899999987520089--8799997388556688998198833448972584899
Q gi|255764460|r 55 LDIALGIGGFPKGRIVEIYGPESSGKTTLALHTIAQSQKTG--GTCAFVDAEHALDSIYARKLGVDLKNLLISQPDTGEQ 132 (363)
Q Consensus 55 lD~~Lg~GG~p~Gri~ei~G~~~sGKTtlal~~~a~~qk~g--~~~~~iD~E~~~~~~~a~~~Gvd~~~l~~~~~~~~E~ 132 (363)
T Consensus 28 L~~~i~~~~~ph---lLf~GppG~GKTt~a~~la~~l~~~~~~~~~lelnas---d-----~r~id-------------~ 83 (318)
T PRK00440 28 LKSFVKEKNMPH---LLFAGPPGTGKTTAALALARELYGEYWRENFLELNAS---D-----ERGID-------------V 83 (318)
T ss_pred HHHHHHCCCCCE---EEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCC---C-----CCCHH-------------H
T ss_conf 999998799866---9888959988999999999997698643476895164---5-----66717-------------8
Q ss_pred HHHHHHHHHHC-----CCCCEEEEECCCCCCC
Q ss_conf 99999999744-----8976899814333220
Q gi|255764460|r 133 ALEITDMLVRS-----GAVDIIVIDSVAALTP 159 (363)
Q Consensus 133 ~~~i~~~li~~-----~~~~liViDSi~al~p 159 (363)
T Consensus 84 vr~~i~~~~~~~~~~~~~~kiiiiDE~d~l~~ 115 (318)
T PRK00440 84 IRNKIKEFARTAPVGGAPFKIIFLDEADNLTS 115 (318)
T ss_pred HHHHHHHHHHHCCCCCCCEEEEEEECCCCCCH
T ss_conf 99999999972677899738999868553225