HHsearch alignment for GI: 255764460 and conserved domain: PRK04296
>PRK04296 thymidine kinase; Provisional.
Probab=96.27 E-value=0.022 Score=34.66 Aligned_cols=89 Identities=19% Similarity=0.308 Sum_probs=58.3
Q ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECC--CCCCHH-HHHHHCCCHHHEEEEECCCHHHHHHHHHHHHH
Q ss_conf 880799970687237899999987520089879999738--855668-89981988334489725848999999999974
Q gi|255764460|r 66 KGRIVEIYGPESSGKTTLALHTIAQSQKTGGTCAFVDAE--HALDSI-YARKLGVDLKNLLISQPDTGEQALEITDMLVR 142 (363)
Q Consensus 66 ~Gri~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~iD~E--~~~~~~-~a~~~Gvd~~~l~~~~~~~~E~~~~i~~~li~ 142 (363)
T Consensus 1 mg~L~~i~GpMfSGKTteLi~~~~~~~~~gkkvl~~kp~~D~Ry~~~~I~Sh~g~~~~~~~---v~~~~~i~~~~~~~~~ 77 (197)
T PRK04296 1 MAKLYFIYGAMNSGKSTELLQRAYNYEERGMKVLVFTPAIDDRYGEGKVVSRIGLSREAIL---ISSDTDIFELIEEEHE 77 (197)
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEECCCCCEEEEEE---ECCHHHHHHHHHHHHC
T ss_conf 9559999934278889999999999998799599998534465777857867898346899---4878999999987630
Q ss_pred CCCCCEEEEECCCCC
Q ss_conf 489768998143332
Q gi|255764460|r 143 SGAVDIIVIDSVAAL 157 (363)
Q Consensus 143 ~~~~~liViDSi~al 157 (363)
T Consensus 78 ~~~~dvI~IDEaQFf 92 (197)
T PRK04296 78 GGKIDCVLIDEAQFL 92 (197)
T ss_pred CCCCCEEEECCHHCC
T ss_conf 478568997202127