HHsearch alignment for GI: 255764460 and conserved domain: PRK05642

>PRK05642 DNA replication initiation factor; Validated.
Probab=97.45  E-value=0.0011  Score=42.85  Aligned_cols=89  Identities=15%  Similarity=0.314  Sum_probs=58.0

Q ss_pred             CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCC--CHHHHHHH-CCC---HHHEE--EEECCCHHH
Q ss_conf             89726880799970687237899999987520089879999738855--66889981-988---33448--972584899
Q gi|255764460|r   61 IGGFPKGRIVEIYGPESSGKTTLALHTIAQSQKTGGTCAFVDAEHAL--DSIYARKL-GVD---LKNLL--ISQPDTGEQ  132 (363)
Q Consensus        61 ~GG~p~Gri~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~iD~E~~~--~~~~a~~~-Gvd---~~~l~--~~~~~~~E~  132 (363)
T Consensus        40 ~~~~~~~-~l~i~G~~G~GKTHLL~A~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~l~~~d~l~IDDi~~i~g~~~~e~~  118 (234)
T PRK05642         40 DAGWTES-LIYLWGKDGVGRSHLLQAACLRFEQRGEPAVYLPLAELLDRGPELLDNLEQYELVCIDDLDVIAGKADWEEA  118 (234)
T ss_pred             CCCCCCC-EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCEEEEECHHHHCCCHHHHHH
T ss_conf             6787788-389988999988999999999998079967997899987544999862422798989364554688599999


Q ss_pred             HHHHHHHHHHCCCCCEEEE
Q ss_conf             9999999974489768998
Q gi|255764460|r  133 ALEITDMLVRSGAVDIIVI  151 (363)
Q Consensus       133 ~~~i~~~li~~~~~~liVi  151 (363)
T Consensus       119 lF~l~N~~~~~~~-~llit  136 (234)
T PRK05642        119 LFHLFNRLRDSGR-RLLLA  136 (234)
T ss_pred             HHHHHHHHHHCCC-EEEEE
T ss_conf             9999999998399-59995