HHsearch alignment for GI: 255764460 and conserved domain: PRK05922
>PRK05922 type III secretion system ATPase; Validated.
Probab=97.68 E-value=0.00017 Score=48.03 Aligned_cols=111 Identities=18% Similarity=0.292 Sum_probs=68.8
Q ss_pred CCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEE-EECCCCCC-HHHHHHH--CCC
Q ss_conf 4655014772789997238972688079997068723789999998752008987999-97388556-6889981--988
Q gi|255764460|r 43 EGIEVVSSGSLGLDIALGIGGFPKGRIVEIYGPESSGKTTLALHTIAQSQKTGGTCAF-VDAEHALD-SIYARKL--GVD 118 (363)
Q Consensus 43 ~~~~~i~TG~~~lD~~Lg~GG~p~Gri~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~-iD~E~~~~-~~~a~~~--Gvd 118 (363)
T Consensus 136 ~i~e~L~TGIraID~l~p---igrGQR~gIf~g~GvGKt~Ll~~ia~~-~~~~-v~V~alIGeR~rEv~efie~~~~~~~ 210 (434)
T PRK05922 136 PIQEIFPTGIKAIDAFLT---LGKGQRIGVFSEPGSGKSSLLSTIAKG-SKST-INVIALIGERGREVREYIEQHKEGLK 210 (434)
T ss_pred CCCCCCCCCCEEEECCCC---CCCCCEEEECCCCCCCHHHHHHHHHHC-CCCC-EEEEEEEEEEHHHHHHHHHHHHHCCC
T ss_conf 888755478556735677---246767773079999789999867653-6787-59998455138999999998661345
Q ss_pred HHHEE--EEECC--CHH------HHHHHHHHHHHCCCCCEEEEECCCCCC
Q ss_conf 33448--97258--489------999999999744897689981433322
Q gi|255764460|r 119 LKNLL--ISQPD--TGE------QALEITDMLVRSGAVDIIVIDSVAALT 158 (363)
Q Consensus 119 ~~~l~--~~~~~--~~E------~~~~i~~~li~~~~~~liViDSi~al~ 158 (363)
T Consensus 211 ~~~tvvv~atsd~p~~~r~~a~~~a~aiAEyfrd~G~~VLl~~Dsltr~A 260 (434)
T PRK05922 211 AQRTIIIASPAHETAPTKVIAGRAAMTIAEYFRDQGHRVLFIMDSLSRWI 260 (434)
T ss_pred CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHH
T ss_conf 21037875037788788899998876799999977996799954788999