HHsearch alignment for GI: 255764460 and conserved domain: PRK05973

>PRK05973 replicative DNA helicase; Provisional.
Probab=98.86  E-value=5.1e-08  Score=70.26  Aligned_cols=167  Identities=28%  Similarity=0.291  Sum_probs=108.3

Q ss_pred             HHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH
Q ss_conf             99999999999867618873797036655334655014772789997238972688079997068723789999998752
Q gi|255764460|r   12 KSKALEAALSQIQRVYGKGAIMQLGSQGSIFEGIEVVSSGSLGLDIALGIGGFPKGRIVEIYGPESSGKTTLALHTIAQS   91 (363)
Q Consensus        12 k~~~l~~~~~~i~k~~g~~~~~~lg~~~~~~~~~~~i~TG~~~lD~~Lg~GG~p~Gri~ei~G~~~sGKTtlal~~~a~~   91 (363)
T Consensus        21 ~~i~lh~ald~ia~~egf~~ws~l~---------~~~~~~~pa~~--l-~~gLqPGDLIIlAARPsMGKTafaLnla~~A   88 (237)
T PRK05973         21 QNIPLHEALDQIAATEGFSRWSLLA---------AKAAATTPAEE--L-FGQLRPGDLVLLGARPGQGKTLLGLELAVEA   88 (237)
T ss_pred             CCCCHHHHHHHHHHHCCCCHHHHHH---------HHHCCCCCHHH--H-HCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf             4885789999999862712168888---------76303695899--8-5689986779994289887899999999999


Q ss_pred             HHCCCEEEEEECCCCCCH--HHHHHHCCCHH---HEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHH
Q ss_conf             008987999973885566--88998198833---4489725848999999999974489768998143332202655434
Q gi|255764460|r   92 QKTGGTCAFVDAEHALDS--IYARKLGVDLK---NLLISQPDTGEQALEITDMLVRSGAVDIIVIDSVAALTPRAEIEGD  166 (363)
Q Consensus        92 qk~g~~~~~iD~E~~~~~--~~a~~~Gvd~~---~l~~~~~~~~E~~~~i~~~li~~~~~~liViDSi~al~p~~Eie~~  166 (363)
T Consensus        89 ~k~g~~v~fFSLEM~~~ql~~RL~~~~~~~~~~~~~~~iD~sd~i~~~~i~rrl~~~~~~~LIVIDYLQLM~~~r~----  164 (237)
T PRK05973         89 MKSGRTGVFFTLEYTEKDVLDRLRALGVDRAQFADLFEFDTSDAICADYIIARLASAPRGTLVVIDYLQLLDQRRE----  164 (237)
T ss_pred             HHHCCCEEEEEECCCHHHHHHHHHHCCCCHHHCCCCCEECCCHHHHHHHHHHHHHHCCCCCEEEEECHHHHCCCCC----
T ss_conf             9959966999615999999999997277833406751003830333999999985278996899976775266778----


Q ss_pred             HHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf             5553022478887677677776420178189998634
Q gi|255764460|r  167 MGESLPGMQARLMSQALRKLTSSISRSKCILVFINQM  203 (363)
Q Consensus       167 ~~d~~~g~~ar~ms~~lrkl~~~~~k~~~~~i~iNQ~  203 (363)
T Consensus       165 --~~ei-------seisRsLK~lAkEl~vPVvaLSQL  192 (237)
T PRK05973        165 --KPDL-------SVQVRALKSFARKRGVILVFISQI  192 (237)
T ss_pred             --CCCH-------HHHHHHHHHHHHHHCCCEEEEECC
T ss_conf             --8668-------999999999999869939994003