HHsearch alignment for GI: 255764460 and conserved domain: PRK05973
>PRK05973 replicative DNA helicase; Provisional.
Probab=98.86 E-value=5.1e-08 Score=70.26 Aligned_cols=167 Identities=28% Similarity=0.291 Sum_probs=108.3
Q ss_pred HHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH
Q ss_conf 99999999999867618873797036655334655014772789997238972688079997068723789999998752
Q gi|255764460|r 12 KSKALEAALSQIQRVYGKGAIMQLGSQGSIFEGIEVVSSGSLGLDIALGIGGFPKGRIVEIYGPESSGKTTLALHTIAQS 91 (363)
Q Consensus 12 k~~~l~~~~~~i~k~~g~~~~~~lg~~~~~~~~~~~i~TG~~~lD~~Lg~GG~p~Gri~ei~G~~~sGKTtlal~~~a~~ 91 (363)
T Consensus 21 ~~i~lh~ald~ia~~egf~~ws~l~---------~~~~~~~pa~~--l-~~gLqPGDLIIlAARPsMGKTafaLnla~~A 88 (237)
T PRK05973 21 QNIPLHEALDQIAATEGFSRWSLLA---------AKAAATTPAEE--L-FGQLRPGDLVLLGARPGQGKTLLGLELAVEA 88 (237)
T ss_pred CCCCHHHHHHHHHHHCCCCHHHHHH---------HHHCCCCCHHH--H-HCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 4885789999999862712168888---------76303695899--8-5689986779994289887899999999999
Q ss_pred HHCCCEEEEEECCCCCCH--HHHHHHCCCHH---HEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHH
Q ss_conf 008987999973885566--88998198833---4489725848999999999974489768998143332202655434
Q gi|255764460|r 92 QKTGGTCAFVDAEHALDS--IYARKLGVDLK---NLLISQPDTGEQALEITDMLVRSGAVDIIVIDSVAALTPRAEIEGD 166 (363)
Q Consensus 92 qk~g~~~~~iD~E~~~~~--~~a~~~Gvd~~---~l~~~~~~~~E~~~~i~~~li~~~~~~liViDSi~al~p~~Eie~~ 166 (363)
T Consensus 89 ~k~g~~v~fFSLEM~~~ql~~RL~~~~~~~~~~~~~~~iD~sd~i~~~~i~rrl~~~~~~~LIVIDYLQLM~~~r~---- 164 (237)
T PRK05973 89 MKSGRTGVFFTLEYTEKDVLDRLRALGVDRAQFADLFEFDTSDAICADYIIARLASAPRGTLVVIDYLQLLDQRRE---- 164 (237)
T ss_pred HHHCCCEEEEEECCCHHHHHHHHHHCCCCHHHCCCCCEECCCHHHHHHHHHHHHHHCCCCCEEEEECHHHHCCCCC----
T ss_conf 9959966999615999999999997277833406751003830333999999985278996899976775266778----
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf 5553022478887677677776420178189998634
Q gi|255764460|r 167 MGESLPGMQARLMSQALRKLTSSISRSKCILVFINQM 203 (363)
Q Consensus 167 ~~d~~~g~~ar~ms~~lrkl~~~~~k~~~~~i~iNQ~ 203 (363)
T Consensus 165 --~~ei-------seisRsLK~lAkEl~vPVvaLSQL 192 (237)
T PRK05973 165 --KPDL-------SVQVRALKSFARKRGVILVFISQI 192 (237)
T ss_pred --CCCH-------HHHHHHHHHHHHHHCCCEEEEECC
T ss_conf --8668-------999999999999869939994003