HHsearch alignment for GI: 255764460 and conserved domain: PRK06002

>PRK06002 fliI flagellum-specific ATP synthase; Validated.
Probab=97.74  E-value=0.00024  Score=47.05  Aligned_cols=111  Identities=17%  Similarity=0.219  Sum_probs=69.5

Q ss_pred             CCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCC-CHHHHHHH-CCCHHH
Q ss_conf             6550147727899972389726880799970687237899999987520089879999738855-66889981-988334
Q gi|255764460|r   44 GIEVVSSGSLGLDIALGIGGFPKGRIVEIYGPESSGKTTLALHTIAQSQKTGGTCAFVDAEHAL-DSIYARKL-GVDLKN  121 (363)
Q Consensus        44 ~~~~i~TG~~~lD~~Lg~GG~p~Gri~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~iD~E~~~-~~~~a~~~-Gvd~~~  121 (363)
T Consensus       145 i~epL~TGIkaID~l~pi---grGQR~gIfgg~GvGKTtLl-~~i~~~~~~d~vV~~lIGeRgrEv~ef~e~~l~~~l~~  220 (450)
T PRK06002        145 VDTPLRTGVRVIDIFTPL---CAGQRIGIFAGSGVGKSTLL-AMLARADAFDTVVVALVGERGREVREFLEDTLADHLSK  220 (450)
T ss_pred             CCCCCCCCHHHHHHHCCC---CCCCEEEECCCCCCCHHHHH-HHHHHHCCCCEEEEEEEEEEHHHHHHHHHHHHHCCCCE
T ss_conf             887663103133421460---14877774268999875999-99986258987999986474899999999876422000


Q ss_pred             --EEEEECC--CHH------HHHHHHHHHHHCCCCCEEEEECCCCCC
Q ss_conf             --4897258--489------999999999744897689981433322
Q gi|255764460|r  122 --LLISQPD--TGE------QALEITDMLVRSGAVDIIVIDSVAALT  158 (363)
Q Consensus       122 --l~~~~~~--~~E------~~~~i~~~li~~~~~~liViDSi~al~  158 (363)
T Consensus       221 svvV~atsd~~p~~r~~a~~~a~aiAEyfrd~G~~VLli~DslTr~A  267 (450)
T PRK06002        221 AVAVVATGDESPMMRRLAPKTATAIAEYFRDRGENVLLIVDSVTRFA  267 (450)
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHH
T ss_conf             59997058898288765565544379999967996799982617888