HHsearch alignment for GI: 255764460 and conserved domain: PRK06526
>PRK06526 transposase; Provisional.
Probab=97.82 E-value=0.00014 Score=48.61 Aligned_cols=131 Identities=18% Similarity=0.222 Sum_probs=79.4
Q ss_pred HHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCHHHEEEEECCCHHHHH
Q ss_conf 99972389726880799970687237899999987520089879999738855668899819883344897258489999
Q gi|255764460|r 55 LDIALGIGGFPKGRIVEIYGPESSGKTTLALHTIAQSQKTGGTCAFVDAEHALDSIYARKLGVDLKNLLISQPDTGEQAL 134 (363)
Q Consensus 55 lD~~Lg~GG~p~Gri~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~iD~E~~~~~~~a~~~Gvd~~~l~~~~~~~~E~~~ 134 (363)
T Consensus 86 i~~La~~~fi~~~~Nvil~G~~GtGKThLA~Alg~~A~~~G~~v~f~~~~~L-----~~~L~~a~~------~g~~~~-- 152 (254)
T PRK06526 86 IAHLGTLDFVTGKENVVFLGPPGTGKTHLAIGLGIRACQAGHRVLFATAAQW-----VARLAAAHH------AGRLQD-- 152 (254)
T ss_pred HHHHHCCCHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHH-----HHHHHHHHH------CCCHHH--
T ss_conf 9998637177658878998999986899999999999986996799877999-----999999885------580999--
Q ss_pred HHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC
Q ss_conf 99999974489768998143332202655434555302247888767767777642017818999863411456654665
Q gi|255764460|r 135 EITDMLVRSGAVDIIVIDSVAALTPRAEIEGDMGESLPGMQARLMSQALRKLTSSISRSKCILVFINQMRMKIGVMFGSP 214 (363)
Q Consensus 135 ~i~~~li~~~~~~liViDSi~al~p~~Eie~~~~d~~~g~~ar~ms~~lrkl~~~~~k~~~~~i~iNQ~r~~ig~m~g~p 214 (363)
T Consensus 153 -~~~~l---~~~dLLIiDe~g~~~-~~~-----------~~a~~---lf~li~~Ry-e~~S~IiTSn~~~~~W~~~f~D~ 212 (254)
T PRK06526 153 -ELVKL---GRIPLLIVDEVGYIP-FEA-----------EAANL---FFQLVSSRY-ERASLIVTSNKPFGRWGEVFGDD 212 (254)
T ss_pred -HHHHH---HCCCEEEEECCCCCC-CCH-----------HHHHH---HHHHHHHHH-CCCCEEEECCCCHHHHHHHCCCH
T ss_conf -99985---136877650213644-788-----------99999---999999997-45886766589866888864868
Q ss_pred CCCC
Q ss_conf 1256
Q gi|255764460|r 215 ETTT 218 (363)
Q Consensus 215 ~~~~ 218 (363)
T Consensus 213 ~la~ 216 (254)
T PRK06526 213 VVAA 216 (254)
T ss_pred HHHH
T ss_conf 9999