HHsearch alignment for GI: 255764460 and conserved domain: PRK06731
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated.
Probab=98.14 E-value=7.7e-05 Score=50.19 Aligned_cols=85 Identities=19% Similarity=0.260 Sum_probs=60.2
Q ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHH-------HHHHHCCCHHHEEEEECCCHHHHHHHHHHH
Q ss_conf 0799970687237899999987520089879999738855668-------899819883344897258489999999999
Q gi|255764460|r 68 RIVEIYGPESSGKTTLALHTIAQSQKTGGTCAFVDAEHALDSI-------YARKLGVDLKNLLISQPDTGEQALEITDML 140 (363)
Q Consensus 68 ri~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~iD~E~~~~~~-------~a~~~Gvd~~~l~~~~~~~~E~~~~i~~~l 140 (363)
T Consensus 76 ~vI~lvG~~G~GKTTT~AKLA~~~~~~~~kV~lia~D-tyR~aA~eQLk~~a~~l~v~~~-----~~~~~~~~~~~~~~~ 149 (270)
T PRK06731 76 QTIALIGPTGVGKTTTLAKMAWQFHGKKKTVGFITTD-HSRIGTVQQLQDYVKTIGFEVI-----AVRDEAAMTRALTYF 149 (270)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEEC-CCCHHHHHHHHHHHHHHCCCEE-----CCCCHHHHHHHHHHH
T ss_conf 1899988898988999999999998679908999838-8888899999999998199535-----458878999999999
Q ss_pred HHCCCCCEEEEECCCCCC
Q ss_conf 744897689981433322
Q gi|255764460|r 141 VRSGAVDIIVIDSVAALT 158 (363)
Q Consensus 141 i~~~~~~liViDSi~al~ 158 (363)
T Consensus 150 ~~~~~~DvilIDTAGR~~ 167 (270)
T PRK06731 150 KEEARVDYILIDTAGKNY 167 (270)
T ss_pred HHHCCCCEEEEECCCCCC
T ss_conf 997699999997999871