HHsearch alignment for GI: 255764460 and conserved domain: PRK06731

>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated.
Probab=98.14  E-value=7.7e-05  Score=50.19  Aligned_cols=85  Identities=19%  Similarity=0.260  Sum_probs=60.2

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHH-------HHHHHCCCHHHEEEEECCCHHHHHHHHHHH
Q ss_conf             0799970687237899999987520089879999738855668-------899819883344897258489999999999
Q gi|255764460|r   68 RIVEIYGPESSGKTTLALHTIAQSQKTGGTCAFVDAEHALDSI-------YARKLGVDLKNLLISQPDTGEQALEITDML  140 (363)
Q Consensus        68 ri~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~iD~E~~~~~~-------~a~~~Gvd~~~l~~~~~~~~E~~~~i~~~l  140 (363)
T Consensus        76 ~vI~lvG~~G~GKTTT~AKLA~~~~~~~~kV~lia~D-tyR~aA~eQLk~~a~~l~v~~~-----~~~~~~~~~~~~~~~  149 (270)
T PRK06731         76 QTIALIGPTGVGKTTTLAKMAWQFHGKKKTVGFITTD-HSRIGTVQQLQDYVKTIGFEVI-----AVRDEAAMTRALTYF  149 (270)
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEEC-CCCHHHHHHHHHHHHHHCCCEE-----CCCCHHHHHHHHHHH
T ss_conf             1899988898988999999999998679908999838-8888899999999998199535-----458878999999999


Q ss_pred             HHCCCCCEEEEECCCCCC
Q ss_conf             744897689981433322
Q gi|255764460|r  141 VRSGAVDIIVIDSVAALT  158 (363)
Q Consensus       141 i~~~~~~liViDSi~al~  158 (363)
T Consensus       150 ~~~~~~DvilIDTAGR~~  167 (270)
T PRK06731        150 KEEARVDYILIDTAGKNY  167 (270)
T ss_pred             HHHCCCCEEEEECCCCCC
T ss_conf             997699999997999871