HHsearch alignment for GI: 255764460 and conserved domain: PRK06835
>PRK06835 DNA replication protein DnaC; Validated.
Probab=97.59 E-value=0.00085 Score=43.57 Aligned_cols=115 Identities=16% Similarity=0.276 Sum_probs=71.4
Q ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCHHHEEEEECCCHHHHHHHHHHHHHCCCCC
Q ss_conf 07999706872378999999875200898799997388556688998198833448972584899999999997448976
Q gi|255764460|r 68 RIVEIYGPESSGKTTLALHTIAQSQKTGGTCAFVDAEHALDSIYARKLGVDLKNLLISQPDTGEQALEITDMLVRSGAVD 147 (363)
Q Consensus 68 ri~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~iD~E~~~~~~~a~~~Gvd~~~l~~~~~~~~E~~~~i~~~li~~~~~~ 147 (363)
T Consensus 184 ~nLlf~G~~G~GKTfLa~~IA~ell~~g~sViy~ta~~L~~~--l~~~~--------~~~~~~~--~~~~~~l~---~~D 248 (330)
T PRK06835 184 ENLLFYGNTGTGKTFLSNCIAKELLDRGKTVIYRTSDELIEN--LREIR--------FNNDNDA--PELEDLLI---NCD 248 (330)
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHH--HHHHH--------CCCCCCH--HHHHHHHH---HCC
T ss_conf 866988999998899999999999987994999629999999--99975--------4576448--99999996---189
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC
Q ss_conf 89981433322026554345553022478887677677776420178189998634114566546
Q gi|255764460|r 148 IIVIDSVAALTPRAEIEGDMGESLPGMQARLMSQALRKLTSSISRSKCILVFINQMRMKIGVMFG 212 (363)
Q Consensus 148 liViDSi~al~p~~Eie~~~~d~~~g~~ar~ms~~lrkl~~~~~k~~~~~i~iNQ~r~~ig~m~g 212 (363)
T Consensus 249 LLIIDDLG~E~~t-----~----------~~~~~Lf~iIN~R~~~~k~tIITTNl~~~eL~~~y~ 298 (330)
T PRK06835 249 LLIIDDLGTESIT-----E----------FSKTELFNLINKRLLMNKKMIISTNLSLEELLKTYS 298 (330)
T ss_pred EEEEECCCCCCCC-----H----------HHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHH
T ss_conf 8997210345588-----6----------899999999999986799979988999899999874