HHsearch alignment for GI: 255764460 and conserved domain: PRK07004
>PRK07004 replicative DNA helicase; Provisional.
Probab=99.58 E-value=1.6e-12 Score=98.75 Aligned_cols=220 Identities=18% Similarity=0.207 Sum_probs=138.4
Q ss_pred CCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH-HCCCEEEEEECCCCCCHHHHHHH-----CCC
Q ss_conf 550147727899972389726880799970687237899999987520-08987999973885566889981-----988
Q gi|255764460|r 45 IEVVSSGSLGLDIALGIGGFPKGRIVEIYGPESSGKTTLALHTIAQSQ-KTGGTCAFVDAEHALDSIYARKL-----GVD 118 (363)
Q Consensus 45 ~~~i~TG~~~lD~~Lg~GG~p~Gri~ei~G~~~sGKTtlal~~~a~~q-k~g~~~~~iD~E~~~~~~~a~~~-----Gvd 118 (363)
T Consensus 193 ~~Gi~TGf~~LD~~t--~Gl~~gdLiIIAARPsmGKTafAlniA~n~A~~~g~~V~~FSLEMs~e-ql~~Rlls~~s~I~ 269 (460)
T PRK07004 193 VTGTPTGFVDLDRMT--SGMHGGELIIVAGRPSMGKTAFSMNIGEYVAVEYGLPVAVFSMEMPGT-QLAMRMLGSVGRLD 269 (460)
T ss_pred CCCCCCCHHHHHHHH--CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHH-HHHHHHHHHCCCCC
T ss_conf 853867938898652--389877579997368764269999999999872588669984779999-99999998606988
Q ss_pred HHHE-------------------------EEEE-CC-CHHHHHHHHHHHHHC-CCCCEEEEECCCCCCCHHHHHHHHHHH
Q ss_conf 3344-------------------------8972-58-489999999999744-897689981433322026554345553
Q gi|255764460|r 119 LKNL-------------------------LISQ-PD-TGEQALEITDMLVRS-GAVDIIVIDSVAALTPRAEIEGDMGES 170 (363)
Q Consensus 119 ~~~l-------------------------~~~~-~~-~~E~~~~i~~~li~~-~~~~liViDSi~al~p~~Eie~~~~d~ 170 (363)
T Consensus 270 ~~~ir~g~l~~~e~~~i~~a~~~l~~~~l~IdD~~~lt~~~ira~~Rr~~~~~g~l~lvviDYlqli~~~~~--~----- 342 (460)
T PRK07004 270 QHRMRTGRLTDEDWPKLTHAVQKMSEAQLFIDETGGLNPMELRSRARRLARQCGKLGLIIIDYLQLMSGSSQ--G----- 342 (460)
T ss_pred CCHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCCC--C-----
T ss_conf 211007889999999999999998559748968987307899999999997435888998507754478888--8-----
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC-CCCCCC--CCCCCCCCCCEEEEEECCCCCCCCCEEEE
Q ss_conf 022478887677677776420178189998634114566546-651256--55311111124897504553445772476
Q gi|255764460|r 171 LPGMQARLMSQALRKLTSSISRSKCILVFINQMRMKIGVMFG-SPETTT--GGNALKFYSSVRLDIRRVGSIKDKDSITG 247 (363)
Q Consensus 171 ~~g~~ar~ms~~lrkl~~~~~k~~~~~i~iNQ~r~~ig~m~g-~p~~~~--GG~al~~~aS~rl~i~k~~~ik~~~~~iG 247 (363)
T Consensus 343 --~~r~~ei~~isr~lK~lAkel~ipvi~lsQLnR~~e~R~dkrP~lsDLReSGsIEQDADvV~fL~r~~~-y~~~~~~~ 419 (460)
T PRK07004 343 --ENRATEISEISRSLKSLAKELDVPVIALSQLNRGLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEV-YNPDSPDK 419 (460)
T ss_pred --CCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHCCCCCHHHCCCEEEEECCCCC-CCCCCCCC
T ss_conf --889999999999999999996997899704684312278998754232023320320778999754101-58998888
Q ss_pred EEEEEEEEECCCCCCCCEEEEEEECCCCCCCCC
Q ss_conf 799987740577898515899986187423111
Q gi|255764460|r 248 NQTRVKVVKNKMASPFKQVEFDIMYGEGISFFG 280 (363)
Q Consensus 248 ~~v~~kv~Knk~~~P~~~a~~~i~fg~GI~~~~ 280 (363)
T Consensus 420 ~~~e~ivaK~R~G~~g---~v~l~f~~~~~rF~ 449 (460)
T PRK07004 420 GTAEIIIGKQRNGPIG---PVRLTFLGQYTKFD 449 (460)
T ss_pred CEEEEEEECCCCCCCE---EEEEEEECCCCCHH
T ss_conf 8169999736889960---69999856877351