HHsearch alignment for GI: 255764460 and conserved domain: PRK07196
>PRK07196 fliI flagellum-specific ATP synthase; Validated.
Probab=97.63 E-value=0.00021 Score=47.41 Aligned_cols=112 Identities=14% Similarity=0.132 Sum_probs=69.4
Q ss_pred CCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCC-HHHHHH-H---CC
Q ss_conf 465501477278999723897268807999706872378999999875200898799997388556-688998-1---98
Q gi|255764460|r 43 EGIEVVSSGSLGLDIALGIGGFPKGRIVEIYGPESSGKTTLALHTIAQSQKTGGTCAFVDAEHALD-SIYARK-L---GV 117 (363)
Q Consensus 43 ~~~~~i~TG~~~lD~~Lg~GG~p~Gri~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~iD~E~~~~-~~~a~~-~---Gv 117 (363)
T Consensus 134 ~i~e~l~TGIraID~l~p---igrGQRigIfggsGvGKs~Ll~~I~r~-~~advvVi~lIGeRgrEv~efi~~~~~~~~l 209 (434)
T PRK07196 134 AVDTPLDVGVNAINGLLT---IGKGQRVGLMAGSGVGKSVLLGMITRY-TQADVVVVGLIGERGREVKEFIEHSLQAAGM 209 (434)
T ss_pred CCCCCCCCCCEEECCCCC---CCCCCEEEECCCCCCCHHHHHHHHHHH-HCCCEEEEEECCEEHHHHHHHHHHHHHCCCC
T ss_conf 888721268624415577---024524210147899789999999897-3799899974222349999999987424674
Q ss_pred CHHHEEEEECCC--HH------HHHHHHHHHHHCCCCCEEEEECCCCCC
Q ss_conf 833448972584--89------999999999744897689981433322
Q gi|255764460|r 118 DLKNLLISQPDT--GE------QALEITDMLVRSGAVDIIVIDSVAALT 158 (363)
Q Consensus 118 d~~~l~~~~~~~--~E------~~~~i~~~li~~~~~~liViDSi~al~ 158 (363)
T Consensus 210 ~~svvv~atsd~~p~~r~~a~~~a~aiAEyfrd~G~~VLl~~Dsltr~A 258 (434)
T PRK07196 210 AKSVVVAAPADESPLMRIKATELCHAIATYYRDKGHDVLLLVDSLTRYA 258 (434)
T ss_pred CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHH
T ss_conf 3269998458898788889998899899999867985699954746889