HHsearch alignment for GI: 255764460 and conserved domain: PRK08006
>PRK08006 replicative DNA helicase; Provisional.
Probab=99.54 E-value=9.2e-12 Score=93.95 Aligned_cols=222 Identities=14% Similarity=0.182 Sum_probs=136.0
Q ss_pred CCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH-HCCCEEEEEECCCCCCHHHHHHH-----CCC
Q ss_conf 550147727899972389726880799970687237899999987520-08987999973885566889981-----988
Q gi|255764460|r 45 IEVVSSGSLGLDIALGIGGFPKGRIVEIYGPESSGKTTLALHTIAQSQ-KTGGTCAFVDAEHALDSIYARKL-----GVD 118 (363)
Q Consensus 45 ~~~i~TG~~~lD~~Lg~GG~p~Gri~ei~G~~~sGKTtlal~~~a~~q-k~g~~~~~iD~E~~~~~~~a~~~-----Gvd 118 (363)
T Consensus 204 i~Gi~TGf~~LD~~t--~Gl~~G~LiviaaRPsmGKTalalnia~~~a~~~~~~V~~fSlEMs~~-ql~~Rlla~~s~v~ 280 (471)
T PRK08006 204 VTGVNTGYDDLNKKT--AGLQPSDLIIVAARPSMGKTTFAMNLCENAAMLQDKPVLIFSLEMPGE-QIMMRMLASLSRVD 280 (471)
T ss_pred CCCCCCCHHHHHHHH--CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHH-HHHHHHHHHHCCCC
T ss_conf 743668838898641--688217389999469987699999999999986699579981679999-99999999744777
Q ss_pred HHHE-------------------------EEEE--C-CCHHHHHHHHHHHHHC-CCCCEEEEECCCCCCCHHHHHHHHHH
Q ss_conf 3344-------------------------8972--5-8489999999999744-89768998143332202655434555
Q gi|255764460|r 119 LKNL-------------------------LISQ--P-DTGEQALEITDMLVRS-GAVDIIVIDSVAALTPRAEIEGDMGE 169 (363)
Q Consensus 119 ~~~l-------------------------~~~~--~-~~~E~~~~i~~~li~~-~~~~liViDSi~al~p~~Eie~~~~d 169 (363)
T Consensus 281 ~~~i~~g~l~~~e~~~l~~~~~~~~~~~~l~idd~~~~t~~~i~a~~r~~~~~~~gl~lvvIDYLqL~~~~~~--~---~ 355 (471)
T PRK08006 281 QTRIRTGQLDDEDWARISGTMGILLEKRNMYIDDSSGLTPTEVRSRARRIFREHGGLSLIMIDYLQLMRVPSL--S---D 355 (471)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCCC--C---C
T ss_conf 5545368879999999999999997518857736899989999999999998648986899638866167874--4---1
Q ss_pred HCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC-CCCCC--CCCCCCCCCCCEEEEEECCCCCCCCCEEE
Q ss_conf 3022478887677677776420178189998634114566546-65125--65531111112489750455344577247
Q gi|255764460|r 170 SLPGMQARLMSQALRKLTSSISRSKCILVFINQMRMKIGVMFG-SPETT--TGGNALKFYSSVRLDIRRVGSIKDKDSIT 246 (363)
Q Consensus 170 ~~~g~~ar~ms~~lrkl~~~~~k~~~~~i~iNQ~r~~ig~m~g-~p~~~--~GG~al~~~aS~rl~i~k~~~ik~~~~~i 246 (363)
T Consensus 356 ----~r~~ei~~isr~lK~lAkel~ipVi~LsQLnR~~e~R~dkrP~lsDLReSG~IEqdAD~V~~l~R~~~y~~~~~~~ 431 (471)
T PRK08006 356 ----NRTLEIAEISRSLKALAKELQVPVVALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYHENSDLK 431 (471)
T ss_pred ----CHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEEECCCCCCCCCCCCC
T ss_conf ----0668999999999999999699689970168310016999987340224340154286899975503357888878
Q ss_pred EEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCHH
Q ss_conf 679998774057789851589998618742311159
Q gi|255764460|r 247 GNQTRVKVVKNKMASPFKQVEFDIMYGEGISFFGEL 282 (363)
Q Consensus 247 G~~v~~kv~Knk~~~P~~~a~~~i~fg~GI~~~~~l 282 (363)
T Consensus 432 ~-~~elivaKnR~G~~---G~v~l~f~~~~~rF~~~ 463 (471)
T PRK08006 432 G-IAEIIIGKQRNGPI---GTVRLTFNGQWSRFDNY 463 (471)
T ss_pred C-CEEEEEECCCCCCC---EEEEEEEECCCCCCCCC
T ss_conf 8-16999973688986---06999984687754036