HHsearch alignment for GI: 255764460 and conserved domain: PRK08084

>PRK08084 DNA replication initiation factor; Provisional.
Probab=97.62  E-value=0.00021  Score=47.43  Aligned_cols=89  Identities=11%  Similarity=0.222  Sum_probs=58.3

Q ss_pred             CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCC--CCHHHHHHH-CCC---HHHEEEE--ECCCHHHH
Q ss_conf             972688079997068723789999998752008987999973885--566889981-988---3344897--25848999
Q gi|255764460|r   62 GGFPKGRIVEIYGPESSGKTTLALHTIAQSQKTGGTCAFVDAEHA--LDSIYARKL-GVD---LKNLLIS--QPDTGEQA  133 (363)
Q Consensus        62 GG~p~Gri~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~iD~E~~--~~~~~a~~~-Gvd---~~~l~~~--~~~~~E~~  133 (363)
T Consensus        41 ~~~~~-~~l~l~G~~G~GKTHLLqA~~~~~~~~~~~~~yl~~~~~~~~~~~~l~~l~~~dll~iDDi~~i~g~~~~ee~l  119 (235)
T PRK08084         41 RQEHS-GYIYLWGREGAGRSHLLHAACAELSQRGDAVGYVPLDKRAWFVPEVLEGMEQLSLVCIDNIECIAGDELWEMAI  119 (235)
T ss_pred             HCCCC-CEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCEEEEECHHHHCCCHHHHHHH
T ss_conf             57898-76999899998889999999999970798579987798665179999876418989982745546997899999


Q ss_pred             HHHHHHHHHCCCCCEEEE
Q ss_conf             999999974489768998
Q gi|255764460|r  134 LEITDMLVRSGAVDIIVI  151 (363)
Q Consensus       134 ~~i~~~li~~~~~~liVi  151 (363)
T Consensus       120 F~l~N~~~~~g~~~ll~t  137 (235)
T PRK08084        120 FDLYNRILESGKTRLLIT  137 (235)
T ss_pred             HHHHHHHHHHCCCEEEEE
T ss_conf             999999998489669996