HHsearch alignment for GI: 255764460 and conserved domain: PRK08181
>PRK08181 transposase; Validated.
Probab=97.84 E-value=9e-05 Score=49.76 Aligned_cols=122 Identities=21% Similarity=0.307 Sum_probs=76.3
Q ss_pred CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCHHHEEEEEC-CCHHHHHHHHHHH
Q ss_conf 972688079997068723789999998752008987999973885566889981988334489725-8489999999999
Q gi|255764460|r 62 GGFPKGRIVEIYGPESSGKTTLALHTIAQSQKTGGTCAFVDAEHALDSIYARKLGVDLKNLLISQP-DTGEQALEITDML 140 (363)
Q Consensus 62 GG~p~Gri~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~iD~E~~~~~~~a~~~Gvd~~~l~~~~~-~~~E~~~~i~~~l 140 (363)
T Consensus 101 ~fi~~~~Nvil~Gp~GtGKThLA~Alg~~A~~~G~~V~f~~~~~L~-----~~L~~-------a~~~~~~~~---~~~~l 165 (269)
T PRK08181 101 SWLAKGANLLLFGPPGGGKSHLAAAIGLALIENGWRVLFTRTTDLV-----QKLQV-------ARRELQLES---AIAKL 165 (269)
T ss_pred HHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHH-----HHHHH-------HHHCCCHHH---HHHHH
T ss_conf 5886487089989999878899999999999879939997899999-----99999-------775583999---99997
Q ss_pred HHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCC
Q ss_conf 74489768998143332202655434555302247888767767777642017818999863411456654665125
Q gi|255764460|r 141 VRSGAVDIIVIDSVAALTPRAEIEGDMGESLPGMQARLMSQALRKLTSSISRSKCILVFINQMRMKIGVMFGSPETT 217 (363)
Q Consensus 141 i~~~~~~liViDSi~al~p~~Eie~~~~d~~~g~~ar~ms~~lrkl~~~~~k~~~~~i~iNQ~r~~ig~m~g~p~~~ 217 (363)
T Consensus 166 ---~~~dLLIiDe~G~~~-~~~~-----------~~~~---lf~lI~~R-ye~~S~IITSn~~~~~W~~~f~D~~la 223 (269)
T PRK08181 166 ---DKFDLLILDDLAYVT-KDQA-----------ETSV---LFELISAR-YERRSILITANQPFGEWNRVFPDPAMT 223 (269)
T ss_pred ---HCCCEEEEHHCCCCC-CCHH-----------HHHH---HHHHHHHH-HCCCCEEEECCCCHHHHHHHCCCHHHH
T ss_conf ---444601220105667-9989-----------9999---99999998-578888998899977887753868899