HHsearch alignment for GI: 255764460 and conserved domain: PRK08472

>PRK08472 fliI flagellum-specific ATP synthase; Validated.
Probab=97.62  E-value=0.0006  Score=44.53  Aligned_cols=111  Identities=23%  Similarity=0.274  Sum_probs=70.1

Q ss_pred             CCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCC-HHHHHH-HCCCHHH
Q ss_conf             65501477278999723897268807999706872378999999875200898799997388556-688998-1988334
Q gi|255764460|r   44 GIEVVSSGSLGLDIALGIGGFPKGRIVEIYGPESSGKTTLALHTIAQSQKTGGTCAFVDAEHALD-SIYARK-LGVDLKN  121 (363)
Q Consensus        44 ~~~~i~TG~~~lD~~Lg~GG~p~Gri~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~iD~E~~~~-~~~a~~-~Gvd~~~  121 (363)
T Consensus       138 i~epl~TGIraID~l~p---igrGQR~gIf~g~GvGKt~Ll~~i~~~-~~~dv~V~~lIGeR~rEv~efie~~~~~~l~~  213 (435)
T PRK08472        138 IDEVFSVGVKSIDGLLT---CGKGQKLGIFAGSGVGKSTLMGMIVKG-CLAPIKVVALIGERGREIPEFIEKNLGGDLSN  213 (435)
T ss_pred             CCCCCCCCCEEEECCCC---CCCCCEEECCCCCCCCCCHHHHHHHHH-HCCCEEEEEEECEEHHHHHHHHHHHHHHCCCC
T ss_conf             88741158557743266---247766512358999833578888776-15998899761312278999999874113222


Q ss_pred             EE--EEECC--------CHHHHHHHHHHHHHCCCCCEEEEECCCCCC
Q ss_conf             48--97258--------489999999999744897689981433322
Q gi|255764460|r  122 LL--ISQPD--------TGEQALEITDMLVRSGAVDIIVIDSVAALT  158 (363)
Q Consensus       122 l~--~~~~~--------~~E~~~~i~~~li~~~~~~liViDSi~al~  158 (363)
T Consensus       214 tvvvvatsd~p~~~r~~a~~~a~aiAEyfrd~G~~VLl~~Dsltr~A  260 (435)
T PRK08472        214 TVIVVATSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFA  260 (435)
T ss_pred             EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHH
T ss_conf             59998468899899988888999999999867984899843627889