HHsearch alignment for GI: 255764460 and conserved domain: PRK08840

Probab=99.56  E-value=3.6e-12  Score=96.53  Aligned_cols=224  Identities=14%  Similarity=0.163  Sum_probs=137.3

Q ss_pred             CCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH-HCCCEEEEEECCCCCCHHH----HHHHCCCH
Q ss_conf             550147727899972389726880799970687237899999987520-0898799997388556688----99819883
Q gi|255764460|r   45 IEVVSSGSLGLDIALGIGGFPKGRIVEIYGPESSGKTTLALHTIAQSQ-KTGGTCAFVDAEHALDSIY----ARKLGVDL  119 (363)
Q Consensus        45 ~~~i~TG~~~lD~~Lg~GG~p~Gri~ei~G~~~sGKTtlal~~~a~~q-k~g~~~~~iD~E~~~~~~~----a~~~Gvd~  119 (363)
T Consensus       197 ~~Gi~TG~~~LD~~~--~Gl~~G~LiviaaRPsmGKTalalnia~n~a~~~~~~v~~fSlEMs~~ql~~Rlls~~s~i~~  274 (464)
T PRK08840        197 VTGVSTGFTDLNKKT--AGLQGSDLIIVAARPSMGKTTFAMNLCENAAMDQDKPVLIFSLEMPAEQLMMRMLASLSRVDQ  274 (464)
T ss_pred             CCCCCCCHHHHHHHC--CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCC
T ss_conf             736888989998753--698757679998379873689999999999996599679976779989999999998538982


Q ss_pred             HHE-------------------------EEEE--C-CCHHHHHHHHHHHHHCC-CCCEEEEECCCCCCCHHHHHHHHHHH
Q ss_conf             344-------------------------8972--5-84899999999997448-97689981433322026554345553
Q gi|255764460|r  120 KNL-------------------------LISQ--P-DTGEQALEITDMLVRSG-AVDIIVIDSVAALTPRAEIEGDMGES  170 (363)
Q Consensus       120 ~~l-------------------------~~~~--~-~~~E~~~~i~~~li~~~-~~~liViDSi~al~p~~Eie~~~~d~  170 (363)
T Consensus       275 ~~ir~g~l~~~e~~~i~~a~~~~~~~~~l~idd~~~~t~~~i~a~~r~~~~~~~~l~lvvIDYLqL~~~~~~--~---~-  348 (464)
T PRK08840        275 TKIRTGQLDDEDWARISSTMGILMEKKNMYIDDSSGLTPTEVRSRARRVAREHGGLSMIMVDYLQLMRVPAL--Q---D-  348 (464)
T ss_pred             CHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCCC--C---C-
T ss_conf             011148889999999999999998479958856998757999999999998648987899618866067886--4---0-


Q ss_pred             CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC-CCCCC--CCCCCCCCCCCEEEEEECCCCCCCCCEEEE
Q ss_conf             022478887677677776420178189998634114566546-65125--655311111124897504553445772476
Q gi|255764460|r  171 LPGMQARLMSQALRKLTSSISRSKCILVFINQMRMKIGVMFG-SPETT--TGGNALKFYSSVRLDIRRVGSIKDKDSITG  247 (363)
Q Consensus       171 ~~g~~ar~ms~~lrkl~~~~~k~~~~~i~iNQ~r~~ig~m~g-~p~~~--~GG~al~~~aS~rl~i~k~~~ik~~~~~iG  247 (363)
T Consensus       349 ---~r~~~i~~isr~lK~lAkel~vpVv~lsQLnR~~e~r~dkrP~lsDLReSG~IEqdAD~V~~l~R~~~y-~~~~~~~  424 (464)
T PRK08840        349 ---NRTLEIAEISRSLKALAKELNVPVVALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVY-NPDSPLK  424 (464)
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEEECCHHHC-CCCCCCC
T ss_conf             ---367899999999999999969989996316853111699998735012544105438689996443104-8988878


Q ss_pred             EEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCHHH
Q ss_conf             799987740577898515899986187423111599
Q gi|255764460|r  248 NQTRVKVVKNKMASPFKQVEFDIMYGEGISFFGELI  283 (363)
Q Consensus       248 ~~v~~kv~Knk~~~P~~~a~~~i~fg~GI~~~~~ll  283 (363)
T Consensus       425 ~~~elivaKnR~G~~---G~v~l~f~~~~~rF~~~~  457 (464)
T PRK08840        425 GTAEIIIGKQRNGPI---GSVRLTFQGQYSRFDNYA  457 (464)
T ss_pred             CEEEEEEECCCCCCC---EEEEEEEECCCCCCCCCC
T ss_conf             806999972688986---069999856877530368