HHsearch alignment for GI: 255764460 and conserved domain: PRK09183

>PRK09183 transposase/IS protein; Provisional.
Probab=97.73  E-value=0.00016  Score=48.19  Aligned_cols=126  Identities=17%  Similarity=0.199  Sum_probs=73.8

Q ss_pred             CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCHHHEEEEECCCHHHHHHHHHHH
Q ss_conf             89726880799970687237899999987520089879999738855668899819883344897258489999999999
Q gi|255764460|r   61 IGGFPKGRIVEIYGPESSGKTTLALHTIAQSQKTGGTCAFVDAEHALDSIYARKLGVDLKNLLISQPDTGEQALEITDML  140 (363)
Q Consensus        61 ~GG~p~Gri~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~iD~E~~~~~~~a~~~Gvd~~~l~~~~~~~~E~~~~i~~~l  140 (363)
T Consensus        95 ~~fi~~~~Nvil~G~~GtGKThLA~Alg~~A~~~G~~v~f~~~~~L~-----~~L~~a~~------~~~~~---~~l~r~  160 (258)
T PRK09183         95 LSFIERNENIVLLGPSGVGKTHLAIALGYEAVRAGIKVRFTTAADLL-----LQLSTAQR------QGRYK---TTLQRG  160 (258)
T ss_pred             CCHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHH-----HHHHHHHH------CCCHH---HHHHHH
T ss_conf             81665588679989999868999999999999879939997899999-----99999987------68599---999987


Q ss_pred             HHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC-CCCCCCC
Q ss_conf             74489768998143332202655434555302247888767767777642017818999863411456654-6651256
Q gi|255764460|r  141 VRSGAVDIIVIDSVAALTPRAEIEGDMGESLPGMQARLMSQALRKLTSSISRSKCILVFINQMRMKIGVMF-GSPETTT  218 (363)
Q Consensus       141 i~~~~~~liViDSi~al~p~~Eie~~~~d~~~g~~ar~ms~~lrkl~~~~~k~~~~~i~iNQ~r~~ig~m~-g~p~~~~  218 (363)
T Consensus       161 --l~~~dLLIiDdlG~~~-~~~~-----------~~---~~lfeli~~Ry-e~~S~IiTSn~~~~~W~~~f~~D~~la~  221 (258)
T PRK09183        161 --VMAPRLLIIDEIGYLP-FSQE-----------EA---NLFFQVIAKRY-EKGAMILTSNLPFGQWDQTFAGDAALTS  221 (258)
T ss_pred             --HCCCCEEEEHHHHCCC-CCHH-----------HH---HHHHHHHHHHH-CCCCEEEECCCCHHHHHHHCCCCHHHHH
T ss_conf             --4346514431331546-8888-----------99---99999999985-7677899889997898565168699999