HHsearch alignment for GI: 255764460 and conserved domain: PRK09519

>PRK09519 recA recombinase A; Reviewed.
Probab=99.81  E-value=1.1e-20  Score=150.41  Aligned_cols=323  Identities=30%  Similarity=0.484  Sum_probs=269.5

Q ss_pred             HHHHHHHHHHHHHHHHHH--CCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCE---EEEEECCCCHHHHHH
Q ss_conf             769999999999986761--887379703665533465501477278999723897268807---999706872378999
Q gi|255764460|r   10 VDKSKALEAALSQIQRVY--GKGAIMQLGSQGSIFEGIEVVSSGSLGLDIALGIGGFPKGRI---VEIYGPESSGKTTLA   84 (363)
Q Consensus        10 ~~k~~~l~~~~~~i~k~~--g~~~~~~lg~~~~~~~~~~~i~TG~~~lD~~Lg~GG~p~Gri---~ei~G~~~sGKTtla   84 (363)
T Consensus       361 q~~q~~lg~lmG~g~~~~~~g~~~i~~~~~~~~~~d~~~~i~~-------~~g~~~~~~~~is~~v~~~p~e~~g~~~~~  433 (790)
T PRK09519        361 ADHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVTRIAA-------TLGCAAHPQGRISLAIAHRPGERNGVADLC  433 (790)
T ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHH-------CCCCCCCCCCEEEEEEECCCCCCCCCEECC
T ss_conf             7899999998527655787775420222443444314776520-------113345756404433202574235503212


Q ss_pred             HHH-HHHHHHCCCEEE--EEECCCCCCHHHHHHHCCCHHHEEEEECCCH----------HH-HHHHHHHHHHCCC-----
Q ss_conf             999-875200898799--9973885566889981988334489725848----------99-9999999974489-----
Q gi|255764460|r   85 LHT-IAQSQKTGGTCA--FVDAEHALDSIYARKLGVDLKNLLISQPDTG----------EQ-ALEITDMLVRSGA-----  145 (363)
Q Consensus        85 l~~-~a~~qk~g~~~~--~iD~E~~~~~~~a~~~Gvd~~~l~~~~~~~~----------E~-~~~i~~~li~~~~-----  145 (363)
T Consensus       434 ~q~~~~~~l~w~k~~~~~f~~~~~~~d~~~~~~~g~~~~d~~~~~~~~g~l~~~~~~~~e~~a~~i~~~~~~~~~g~~~~  513 (790)
T PRK09519        434 QQAGIYGKLAWEKTIPNWFFEPDIAADIVGNLLFGLFESDGWVSREQTGALRVGYTTTSEQLAHQIHWLLLRFGVGSTVR  513 (790)
T ss_pred             CCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
T ss_conf             00112455443202554334752002510221540101542001344540035744543789999999886327764233


Q ss_pred             -------------------------CCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH--HHHHHC--CCCCE
Q ss_conf             -------------------------7689981433322026554345553022478887677677--776420--17818
Q gi|255764460|r  146 -------------------------VDIIVIDSVAALTPRAEIEGDMGESLPGMQARLMSQALRK--LTSSIS--RSKCI  196 (363)
Q Consensus       146 -------------------------~~liViDSi~al~p~~Eie~~~~d~~~g~~ar~ms~~lrk--l~~~~~--k~~~~  196 (363)
T Consensus       514 ~~~~~q~r~~~~~gr~v~~~~~~~ev~~~~~~~~~~l~~~~~~~G~~g~~~l~-~~~~a~~a~~~~~~a~yva~~m~~~l  592 (790)
T PRK09519        514 DYDPTQKRPSIVNGRRIQSKRQVFEVRISGMDNVTAFAESVPMWGPRGAALIQ-AIPEATQGRRRGSQATYLAAEMTDAV  592 (790)
T ss_pred             CCCCHHCCCCCCCCCHHHHHHCCEEEEEEEECCCCCCCHHHHHCCCCHHHHHH-HHHHHHHHHHHHCCCCCCCHHHHHHH
T ss_conf             36611003466765121221000157777521433346134200642035776-62688898876303431233567779


Q ss_pred             EEEEE-------CCCCCCCCCCCCCCC----CCC-------------------------CCCCCCCCCEE--EEEECCCC
Q ss_conf             99986-------341145665466512----565-------------------------53111111248--97504553
Q gi|255764460|r  197 LVFIN-------QMRMKIGVMFGSPET----TTG-------------------------GNALKFYSSVR--LDIRRVGS  238 (363)
Q Consensus       197 ~i~iN-------Q~r~~ig~m~g~p~~----~~G-------------------------G~al~~~aS~r--l~i~k~~~  238 (363)
T Consensus       593 L~~~~~r~~~~~~~~~~i~~~~~~P~~~~~~~~~~~r~~~~r~~~~~~~~~~~~~~~~~~~~~~-y~~vr~~~~~rr~~t  671 (790)
T PRK09519        593 LNYLDERGVTAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALDDKFLHDMLAEELR-YSVIREVLPTRRART  671 (790)
T ss_pred             HHHHCCCCCCCHHHCCCCCEECCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCHHHHCCCCHHCE-EEEEEECCCCCHHHH
T ss_conf             9985166665533315520324785547676404004455554322102221002124410101-246750466300221


Q ss_pred             CCCCCEEEEEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCEECCCEEEECCEEECCHHHHHHHHHH
Q ss_conf             44577247679998774057789851589998618742311159999973286230274478889450303899999986
Q gi|255764460|r  239 IKDKDSITGNQTRVKVVKNKMASPFKQVEFDIMYGEGISFFGELIDLGVKASIVDKSGAWFSFKGQRLGQGRENSKIFLR  318 (363)
Q Consensus       239 ik~~~~~iG~~v~~kv~Knk~~~P~~~a~~~i~fg~GI~~~~~lldla~~~giI~k~Gawy~~~~e~~gqGk~~~~~~l~  318 (363)
T Consensus       672 ~~~~ve~~~~~~~~~vv~~k~spPFKqAeFdiLYG~GIsreG~LiDlGVe~g~vrKsGaWytYeGeqlGQGKeNArnfL~  751 (790)
T PRK09519        672 FDLEVEELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLIDMGVDQGLIRKSGAWFTYEGEQLGQGKENARNFLV  751 (790)
T ss_pred             HCCCHHHHCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCEEECCCCCCEEECCCCEEEECCCCCCCCHHHHHHHHH
T ss_conf             01101210331233334326689741100123422563545650431320040102572377425231563577888877


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             67999999999999981777545
Q gi|255764460|r  319 ENIEIAENIESLLRQNAGLVADS  341 (363)
Q Consensus       319 enp~l~~~i~~~ire~~~~~~~~  341 (363)
T Consensus       752 ~N~d~AdEIEKkikekLgigavv  774 (790)
T PRK09519        752 ENADVADEIEKKIKEKLGIGAVV  774 (790)
T ss_pred             HCHHHHHHHHHHHHHHHCCCEEE
T ss_conf             49037799999999872875586