HHsearch alignment for GI: 255764460 and conserved domain: PRK12422
>PRK12422 chromosomal replication initiation protein; Provisional.
Probab=97.53 E-value=0.00087 Score=43.51 Aligned_cols=89 Identities=26% Similarity=0.443 Sum_probs=58.8
Q ss_pred CCCCCCCEEEEEECCCCHHHHHHHHHHHH-HHHCCCEEEEEECCCCCCHHHHHHHCC-C----------HHHEEE-----
Q ss_conf 97268807999706872378999999875-200898799997388556688998198-8----------334489-----
Q gi|255764460|r 62 GGFPKGRIVEIYGPESSGKTTLALHTIAQ-SQKTGGTCAFVDAEHALDSIYARKLGV-D----------LKNLLI----- 124 (363)
Q Consensus 62 GG~p~Gri~ei~G~~~sGKTtlal~~~a~-~qk~g~~~~~iD~E~~~~~~~a~~~Gv-d----------~~~l~~----- 124 (363)
T Consensus 137 ~g~~yNPLf-IyG~~GlGKTHLL-~AIgn~i~~~~~kV~Yvtae~-F~~~~v~ai~~~~~~~Fr~~yr~~DvLLIDDIQf 213 (455)
T PRK12422 137 KGFPFNPIY-LFGPEGSGKTHLM-QAAVSALRESGGKILYVSSEL-FTEHLVSAIRSGEMQRFRSFYRNVDALFIEDIEV 213 (455)
T ss_pred CCCCCCCEE-EECCCCCCHHHHH-HHHHHHHHCCCCEEEEECHHH-HHHHHHHHHHCCCHHHHHHHHHCCCEEEEEHHHH
T ss_conf 887678758-8789999789999-999998537998699974999-9999999997588999999996388776314788
Q ss_pred --EECCCHHHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf --72584899999999997448976899814
Q gi|255764460|r 125 --SQPDTGEQALEITDMLVRSGAVDIIVIDS 153 (363)
Q Consensus 125 --~~~~~~E~~~~i~~~li~~~~~~liViDS 153 (363)
T Consensus 214 l~gK~~tqeEff~tfN~L~~~~KQIVitsDr 244 (455)
T PRK12422 214 FSGKGATQEEFFHTFNSLHTEGKLIVISSSY 244 (455)
T ss_pred HHCCHHHHHHHHHHHHHHHHCCCEEEEECCC
T ss_conf 7284889999999999999859969996898