HHsearch alignment for GI: 255764460 and conserved domain: PRK12723

>PRK12723 flagellar biosynthesis regulator FlhF; Provisional.
Probab=97.43  E-value=0.0015  Score=42.10  Aligned_cols=83  Identities=22%  Similarity=0.322  Sum_probs=56.9

Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHHHH----HHCCCEEEEEECCCCCCH-------HHHHHHCCCHHHEEEEECCCHHHHH
Q ss_conf             88079997068723789999998752----008987999973885566-------8899819883344897258489999
Q gi|255764460|r   66 KGRIVEIYGPESSGKTTLALHTIAQS----QKTGGTCAFVDAEHALDS-------IYARKLGVDLKNLLISQPDTGEQAL  134 (363)
Q Consensus        66 ~Gri~ei~G~~~sGKTtlal~~~a~~----qk~g~~~~~iD~E~~~~~-------~~a~~~Gvd~~~l~~~~~~~~E~~~  134 (363)
T Consensus       173 k~~vi~lVGPTGvGKTTTiAKLAa~~~l~~~~k~~~V~lit~D-tyRigAveQLktya~il~vp~~---v~--~~~~dl~  246 (388)
T PRK12723        173 KKRIFILVGPTGVGKTTTIAKLAAIYGINSDDKSLNIKIITID-NYRIGAKKQIQTYGDIMGIPVK---AI--ESFKDLK  246 (388)
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEC-CCCHHHHHHHHHHHHHHCCCEE---EE--CCHHHHH
T ss_conf             7628999899887578799999999998626767737999807-8758899999999999788069---85--7889999


Q ss_pred             HHHHHHHHCCCCCEEEEECCCCC
Q ss_conf             99999974489768998143332
Q gi|255764460|r  135 EITDMLVRSGAVDIIVIDSVAAL  157 (363)
Q Consensus       135 ~i~~~li~~~~~~liViDSi~al  157 (363)
T Consensus       247 ~---~l~~~~~~D~IlIDTAGrs  266 (388)
T PRK12723        247 E---EITQSKDFDLVLIDTIGKS  266 (388)
T ss_pred             H---HHHHHCCCCEEEEECCCCC
T ss_conf             9---9997249999999589988