HHsearch alignment for GI: 255764460 and conserved domain: TIGR00073

>TIGR00073 hypB hydrogenase accessory protein HypB; InterPro: IPR004392 The hydrogenase accessory protein HypB is a GTP hydrolase for assembly of nickel metallocentre of hydrogenase. A similar protein, ureG, is an accessory protein for urease, which also uses nickel.; GO: 0016151 nickel ion binding, 0006461 protein complex assembly.

Probab=96.81  E-value=0.0046  Score=38.94  Aligned_cols=89  Identities=26%  Similarity=0.333  Sum_probs=65.9

Q ss_pred             EEEECCCCHHHHHHHHHHHHHHHCCCEEEEE-ECCCCCCHHHHHHHCCCHHHEEEEECCCHHHH-HH---HH---HHHHH
Q ss_conf             9970687237899999987520089879999-73885566889981988334489725848999-99---99---99974
Q gi|255764460|r   71 EIYGPESSGKTTLALHTIAQSQKTGGTCAFV-DAEHALDSIYARKLGVDLKNLLISQPDTGEQA-LE---IT---DMLVR  142 (363)
Q Consensus        71 ei~G~~~sGKTtlal~~~a~~qk~g~~~~~i-D~E~~~~~~~a~~~Gvd~~~l~~~~~~~~E~~-~~---i~---~~li~  142 (363)
T Consensus        38 NfmsspGSGKT~LiEk~~~~~~~~~K~Avi~GD~~t~~DA~RlR~~G~-----~a~~~nTGk~CHLdA~mv~G~~~~L~~  112 (225)
T TIGR00073        38 NFMSSPGSGKTTLIEKLIERLDDEVKIAVIEGDVQTKNDADRLRKYGV-----PAIQINTGKECHLDAHMVAGAIHALKD  112 (225)
T ss_pred             EECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCC-----EEEEECCCCCCCCHHHHHHHHHHHHHC
T ss_conf             802588611589999999984578978999755322556999986498-----688636886444016678658755421


Q ss_pred             C---CCCCEEEEECCCCCCCHHHHH
Q ss_conf             4---897689981433322026554
Q gi|255764460|r  143 S---GAVDIIVIDSVAALTPRAEIE  164 (363)
Q Consensus       143 ~---~~~~liViDSi~al~p~~Eie  164 (363)
T Consensus       113 ~~ld~~~DlL~IENVGNLvCP~~Fd  137 (225)
T TIGR00073       113 LPLDDISDLLLIENVGNLVCPADFD  137 (225)
T ss_pred             CCCCCCCCEEEEEECCCCEECCCCC
T ss_conf             6888714626886447610067311