HHsearch alignment for GI: 255764460 and conserved domain: TIGR02533
>TIGR02533 type_II_gspE general secretory pathway protein E; InterPro: IPR013369 GspE, the E protein of the type II secretion system, is also referred to as the main terminal branch of the general secretion pathway. ; GO: 0005524 ATP binding, 0008565 protein transporter activity, 0015628 protein secretion by the type II secretion system, 0015627 type II protein secretion system complex.
Probab=96.04 E-value=0.00077 Score=43.86 Aligned_cols=78 Identities=19% Similarity=0.353 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC---CCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHH
Q ss_conf 99999999986761887379703665533465---501477278999723897268807999706872378999999875
Q gi|255764460|r 14 KALEAALSQIQRVYGKGAIMQLGSQGSIFEGI---EVVSSGSLGLDIALGIGGFPKGRIVEIYGPESSGKTTLALHTIAQ 90 (363)
Q Consensus 14 ~~l~~~~~~i~k~~g~~~~~~lg~~~~~~~~~---~~i~TG~~~lD~~Lg~GG~p~Gri~ei~G~~~sGKTtlal~~~a~ 90 (363)
T Consensus 193 r~~DiRVSt~Pt~fGERvVMRLLDK~~~~l~L~~LGm~~~~l~~~~~li~---rpHG-IiLVTGPTGSGKtTTLYaaL~~ 268 (495)
T TIGR02533 193 RDIDIRVSTVPTSFGERVVMRLLDKDAVRLDLEALGMSPELLSSLERLIK---RPHG-IILVTGPTGSGKTTTLYAALSR 268 (495)
T ss_pred EEEEEEEEECCCCCCCEEEHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHH---CCCC-EEEECCCCCCCHHHHHHHHHHH
T ss_conf 44667885305899710000011204777758864888889999999971---8896-1884177898525889999986
Q ss_pred HHHCC
Q ss_conf 20089
Q gi|255764460|r 91 SQKTG 95 (363)
Q Consensus 91 ~qk~g 95 (363)
T Consensus 269 LN~~~ 273 (495)
T TIGR02533 269 LNTPE 273 (495)
T ss_pred HCCCC
T ss_conf 35899