HHsearch alignment for GI: 255764460 and conserved domain: TIGR02545
>TIGR02545 ATP_syn_fliI flagellar protein export ATPase FliI; InterPro: IPR013379 FliI proteins are involved in bacterial flagellum systems, acting to drive protein export for flagellar biosynthesis. The most closely related proteins are the YscN proteins of bacterial type III secretion systems.; GO: 0016887 ATPase activity, 0001539 ciliary or flagellar motility, 0009296 flagellum biogenesis, 0009288 flagellin-based flagellum.
Probab=97.61 E-value=0.00069 Score=44.14 Aligned_cols=190 Identities=21% Similarity=0.333 Sum_probs=115.9
Q ss_pred CCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCC-HHHHHH-HCC
Q ss_conf 533465501477278999723897268807999706872378999999875200898799997388556-688998-198
Q gi|255764460|r 40 SIFEGIEVVSSGSLGLDIALGIGGFPKGRIVEIYGPESSGKTTLALHTIAQSQKTGGTCAFVDAEHALD-SIYARK-LGV 117 (363)
Q Consensus 40 ~~~~~~~~i~TG~~~lD~~Lg~GG~p~Gri~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~iD~E~~~~-~~~a~~-~Gv 117 (363)
T Consensus 134 ~R~rI~~~l~tGVRaId~lLT~G---rGQR~GIFAGSGVGKSTLL-GMiAr~t~ADV~VIALIGERGREV~EFiE~~LG~ 209 (439)
T TIGR02545 134 DRRRIEEVLDTGVRAIDALLTIG---RGQRLGIFAGSGVGKSTLL-GMIARYTEADVNVIALIGERGREVKEFIEDDLGE 209 (439)
T ss_pred CCCCCCCCCCCHHHHHHCCCCCC---CCCEEEEECCCCHHHHHHH-HHHHCCCCCCEEEEEEECCCCCCCHHHHHHHCCC
T ss_conf 78757861121231011103655---6410266337744478898-8875066588789984446566431355430351
Q ss_pred C---HHHEEEEECCC--------HHHHHHHHHHHHHCCCCCEEEEECCC--CCCCHHHHHHHHHHH--CCCHHHHHHHHH
Q ss_conf 8---33448972584--------89999999999744897689981433--322026554345553--022478887677
Q gi|255764460|r 118 D---LKNLLISQPDT--------GEQALEITDMLVRSGAVDIIVIDSVA--ALTPRAEIEGDMGES--LPGMQARLMSQA 182 (363)
Q Consensus 118 d---~~~l~~~~~~~--------~E~~~~i~~~li~~~~~~liViDSi~--al~p~~Eie~~~~d~--~~g~~ar~ms~~ 182 (363)
T Consensus 210 eGl~kSVVVVATSD~spl~R~~aA~~A~~iAEYFRDqGk~VLL~~DSlTRFAmA-qREigLa~GEPP~tkGY----pPSV 284 (439)
T TIGR02545 210 EGLKKSVVVVATSDESPLMRIRAAYAATAIAEYFRDQGKDVLLLMDSLTRFAMA-QREIGLAAGEPPTTKGY----PPSV 284 (439)
T ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHH-HHHHHHHCCCCCCCCCC----CCHH
T ss_conf 102540799827998689998888999999999986498347762117889989-88999871787666789----7048
Q ss_pred HHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEE---------EEEEEE-
Q ss_conf 6777764201781899986341145665466512565531111112489750455344577247---------679998-
Q gi|255764460|r 183 LRKLTSSISRSKCILVFINQMRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRVGSIKDKDSIT---------GNQTRV- 252 (363)
Q Consensus 183 lrkl~~~~~k~~~~~i~iNQ~r~~ig~m~g~p~~~~GG~al~~~aS~rl~i~k~~~ik~~~~~i---------G~~v~~- 252 (363)
T Consensus 285 F~~Lp~L~ERaG---~~--------------p~~~~~GsITa~yTVL-Ve---G---DD~~ePiAD~~RgiLDGHIvLsR 340 (439)
T TIGR02545 285 FSELPRLLERAG---IV--------------PGAKGGGSITAFYTVL-VE---G---DDMNEPIADAVRGILDGHIVLSR 340 (439)
T ss_pred HHHHHHHHHHHC---CC--------------CCCCCCCEEEEEEEEE-EE---C---CCCCCHHHHHHHHHCCCEEEECH
T ss_conf 999999998708---64--------------6988873056899998-73---6---89987378775001022077322
Q ss_pred EEEECCCCCC
Q ss_conf 7740577898
Q gi|255764460|r 253 KVVKNKMASP 262 (363)
Q Consensus 253 kv~Knk~~~P 262 (363)
T Consensus 341 ~lA~~G~YPa 350 (439)
T TIGR02545 341 KLAERGHYPA 350 (439)
T ss_pred HHHHCCCCCC
T ss_conf 6764588987