HHsearch alignment for GI: 255764460 and conserved domain: TIGR02928
>TIGR02928 TIGR02928 orc1/cdc6 family replication initiation protein; InterPro: IPR014277 This set of DNA binding proteins shows homology to the origin recognition complex subunit 1/cell division control protein 6 family in eukaryotes. The proteins in this entry are found exclusively in the archaea. Several members may be found in a genome and interact with each other..
Probab=97.86 E-value=0.00022 Score=47.27 Aligned_cols=138 Identities=20% Similarity=0.329 Sum_probs=86.1
Q ss_pred CCCCCHHHHHHHCC-CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH----C--C-CEEEEEECCCCCCH-----HHHHH
Q ss_conf 14772789997238-97268807999706872378999999875200----8--9-87999973885566-----88998
Q gi|255764460|r 48 VSSGSLGLDIALGI-GGFPKGRIVEIYGPESSGKTTLALHTIAQSQK----T--G-GTCAFVDAEHALDS-----IYARK 114 (363)
Q Consensus 48 i~TG~~~lD~~Lg~-GG~p~Gri~ei~G~~~sGKTtlal~~~a~~qk----~--g-~~~~~iD~E~~~~~-----~~a~~ 114 (363)
T Consensus 26 I~~l~~~L~~~l-~PG~~P~N-i~-iYGkTGtGKT~vt~~v~~~l~~~~~~~d~~D~~~~~~NC~~~~T~y~~~~~L~~~ 102 (383)
T TIGR02928 26 IEELAKALRPIL-RPGSRPSN-IF-IYGKTGTGKTAVTKYVMKELEEAAEDRDVRDVSTVYINCQILDTSYQVLVELANQ 102 (383)
T ss_pred HHHHHHHHHHHH-CCCCCCCC-EE-EECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHH
T ss_conf 999999988750-67489872-58-8788898788999999999999862269971589997785468469999999998
Q ss_pred H-----CCCHHHEEEEECCCHHHHHH-HHHHHH-HCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH-
Q ss_conf 1-----98833448972584899999-999997-448976899814333220265543455530224788876776777-
Q gi|255764460|r 115 L-----GVDLKNLLISQPDTGEQALE-ITDMLV-RSGAVDIIVIDSVAALTPRAEIEGDMGESLPGMQARLMSQALRKL- 186 (363)
Q Consensus 115 ~-----Gvd~~~l~~~~~~~~E~~~~-i~~~li-~~~~~~liViDSi~al~p~~Eie~~~~d~~~g~~ar~ms~~lrkl- 186 (363)
T Consensus 103 ln~~~~~~~vP~tG~----s~~~~~~~l~~~l~~~~~~~~~ivLDEiD~Lv-~~~~d~------PA-yS~~LY-~L~Ra~ 169 (383)
T TIGR02928 103 LNRRGSGEEVPTTGL----STSEVFRELYKELNRERGDSLIIVLDEIDKLV-RKDDDD------PA-YSKLLY-QLSRAR 169 (383)
T ss_pred HCCCCCCCCCCCCCC----CHHHHHHHHHHHHHHHCCCEEEEEECCCCHHH-CCCCCC------HH-HHHHHH-HHHHHH
T ss_conf 515778888988778----78999999999983201887999862310221-588888------07-878853-433100
Q ss_pred -HHHHCCCCCEEEEEE
Q ss_conf -764201781899986
Q gi|255764460|r 187 -TSSISRSKCILVFIN 201 (363)
Q Consensus 187 -~~~~~k~~~~~i~iN 201 (363)
T Consensus 170 ~~~~~~~~~vgvIgIS 185 (383)
T TIGR02928 170 ENGDLENAKVGVIGIS 185 (383)
T ss_pred HCCCCCCCCEEEEEEE
T ss_conf 0357788534899986