HHsearch alignment for GI: 255764460 and conserved domain: TIGR03499

>TIGR03499 FlhF flagellar biosynthetic protein FlhF.
Probab=97.73  E-value=0.00029  Score=46.56  Aligned_cols=82  Identities=26%  Similarity=0.416  Sum_probs=54.7

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHH-CC-CEEEEEECCCCCC-------HHHHHHHCCCHHHEEEEECCCHHHHHH
Q ss_conf             68807999706872378999999875200-89-8799997388556-------688998198833448972584899999
Q gi|255764460|r   65 PKGRIVEIYGPESSGKTTLALHTIAQSQK-TG-GTCAFVDAEHALD-------SIYARKLGVDLKNLLISQPDTGEQALE  135 (363)
Q Consensus        65 p~Gri~ei~G~~~sGKTtlal~~~a~~qk-~g-~~~~~iD~E~~~~-------~~~a~~~Gvd~~~l~~~~~~~~E~~~~  135 (363)
T Consensus       192 ~~~~vi~lvGPTGVGKTTTiAKLAa~~~l~~~~~~V~lIT~D-tyRigA~eQLk~ya~il~vp~~v-----v~~~~~l~~  265 (282)
T TIGR03499       192 EQGGVIALVGPTGVGKTTTLAKLAARFVLEHGKKKVALITTD-TYRIGAVEQLKTYAKILGVPVKV-----ARDPKELAK  265 (282)
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC-CCCHHHHHHHHHHHHHHCCEEEE-----ECCHHHHHH
T ss_conf             567279997788875788999999999997389967999807-77678999999999995974899-----399999999


Q ss_pred             HHHHHHHCCCCCEEEEECCC
Q ss_conf             99999744897689981433
Q gi|255764460|r  136 ITDMLVRSGAVDIIVIDSVA  155 (363)
Q Consensus       136 i~~~li~~~~~~liViDSi~  155 (363)
T Consensus       266 ~l~~~---~~~d~IlIDTaG  282 (282)
T TIGR03499       266 ALERL---RDKDLILIDTAG  282 (282)
T ss_pred             HHHHC---CCCCEEEEECCC
T ss_conf             99865---798999981979