HHsearch alignment for GI: 255764460 and conserved domain: TIGR03522
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=97.00 E-value=0.022 Score=34.59 Aligned_cols=71 Identities=25% Similarity=0.286 Sum_probs=41.7
Q ss_pred CCCCCCEEEEEECCCCHHHHHHHHHHHHHH-HCCCEEEEEECCCCC-CH-HHHHHHCCCHHHEEEEECCCHHHHHH
Q ss_conf 726880799970687237899999987520-089879999738855-66-88998198833448972584899999
Q gi|255764460|r 63 GFPKGRIVEIYGPESSGKTTLALHTIAQSQ-KTGGTCAFVDAEHAL-DS-IYARKLGVDLKNLLISQPDTGEQALE 135 (363)
Q Consensus 63 G~p~Gri~ei~G~~~sGKTtlal~~~a~~q-k~g~~~~~iD~E~~~-~~-~~a~~~Gvd~~~l~~~~~~~~E~~~~ 135 (363)
T Consensus 24 ~v~~Gei~gllGpNGAGKTTl~-~~l~Gl~~p~~G~i-~i~G~~~~~~~~~~~~~ig~~pq~~~l~~~ltv~e~l~ 97 (301)
T TIGR03522 24 EAQKGRIVGFLGPNGAGKSTTM-KIITGYLPPDSGSV-QVCGEDVLQNPKEVQRNIGYLPEHNPLYLDMYVREYLQ 97 (301)
T ss_pred EECCCCEEEEECCCCCCHHHHH-HHHHCCCCCCCCEE-EECCEECCCCHHHHHHHCEEECCCCCCCCCCCHHHHHH
T ss_conf 8859819999999998199999-99967956897779-99275134487999853767455565678889999999