>cd00267 ABC_ATPase ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.

Probab=97.45 E-value=0.0031 Score=40.02 Aligned_cols=117 Identities=21% Similarity=0.358 Sum_probs=66.3 Q ss_pred CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCC-C-HHHHHHHCCCHHHEEEEECCCHHH-HHHHHHH Q ss_conf 726880799970687237899999987520089879999738855-6-688998198833448972584899-9999999 Q gi|255764460|r 63 GFPKGRIVEIYGPESSGKTTLALHTIAQSQKTGGTCAFVDAEHAL-D-SIYARKLGVDLKNLLISQPDTGEQ-ALEITDM 139 (363) Q Consensus 63 G~p~Gri~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~iD~E~~~-~-~~~a~~~Gvd~~~l~~~~~~~~E~-~~~i~~~ 139 (363) T Consensus 21 ~i~~Ge~~~i~G~nGaGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~------v~QLSgGqkqrv~iA~a 94 (157) T cd00267 21 TLKAGEIVALVGPNGSGKSTLLRAIAGLLKPTSGEILIDGKDIAKLPLEELRRRIGY------VPQLSGGQRQRVALARA 94 (157) T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCCCC------CCCCCHHHHHHHHHHHH T ss_conf 987997999987889998999999958847996289999999997999999940608------76688699999999999 Q ss_pred HHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC Q ss_conf 97448976899814333220265543455530224788876776777764201781899986341 Q gi|255764460|r 140 LVRSGAVDIIVIDSVAALTPRAEIEGDMGESLPGMQARLMSQALRKLTSSISRSKCILVFINQMR 204 (363) Q Consensus 140 li~~~~~~liViDSi~al~p~~Eie~~~~d~~~g~~ar~ms~~lrkl~~~~~k~~~~~i~iNQ~r 204 (363) T Consensus 95 l~~~--p~ililDEPtsg-----LD~~-------~~~~l-~~~i~~l----~~~g~tii~vtH~~ 140 (157) T cd00267 95 LLLN--PDLLLLDEPTSG-----LDPA-------SRERL-LELLREL----AEEGRTVIIVTHDP 140 (157) T ss_pred HHCC--CCEEEEECCCCC-----CCHH-------HHHHH-HHHHHHH----HHCCCEEEEEECCH T ss_conf 9709--999999698766-----8999-------99999-9999999----96899999990899

HHsearch alignment for GI: 255764460 and conserved domain: cd00267