HHsearch alignment for GI: 255764460 and conserved domain: cd01120
>cd01120 RecA-like_NTPases RecA-like NTPases. This family includes the NTP binding domain of F1 and V1 H+ATPases, DnaB and related helicases as well as bacterial RecA and related eukaryotic and archaeal recombinases. This group also includes bacterial conjugation proteins and related DNA transfer proteins involved in type II and type IV secretion.
Probab=99.86 E-value=1.1e-20 Score=150.35 Aligned_cols=157 Identities=26% Similarity=0.400 Sum_probs=128.4
Q ss_pred EEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHH----HHHCCCHHHEEEEECCCHH----HHHHHHHHH
Q ss_conf 79997068723789999998752008987999973885566889----9819883344897258489----999999999
Q gi|255764460|r 69 IVEIYGPESSGKTTLALHTIAQSQKTGGTCAFVDAEHALDSIYA----RKLGVDLKNLLISQPDTGE----QALEITDML 140 (363)
Q Consensus 69 i~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~iD~E~~~~~~~a----~~~Gvd~~~l~~~~~~~~E----~~~~i~~~l 140 (363)
T Consensus 1 ~~li~g~~g~GKttl~~~~~~~~~~~~~~~~~~~~ee~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (165)
T cd01120 1 LILVFGPTGSGKTTLALQLALNIATKGGKVVYVDIEEEIEELTERLIGESLKGALDNLIIVFATADDPAAARLLSKAERL 80 (165)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 98999899998999999999998763997999986664489999999862246713079993599976999999999999
Q ss_pred HHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 74489768998143332202655434555302247888767767777642017818999863411456654665125655
Q gi|255764460|r 141 VRSGAVDIIVIDSVAALTPRAEIEGDMGESLPGMQARLMSQALRKLTSSISRSKCILVFINQMRMKIGVMFGSPETTTGG 220 (363)
Q Consensus 141 i~~~~~~liViDSi~al~p~~Eie~~~~d~~~g~~ar~ms~~lrkl~~~~~k~~~~~i~iNQ~r~~ig~m~g~p~~~~GG 220 (363)
T Consensus 81 ~~~~~~vliiiDSit~~~-~a~~e~~------~g~~~~v~~~~~~L~~~Ak~~~itvi~i~~v~~d~~---~~~~~~~g~ 150 (165)
T cd01120 81 RERGGDDLIILDELTRLV-RALREIR------EGYPGELDEELRELLERARKGGVTVIFTLQVPSGDK---GDPRLTRGA 150 (165)
T ss_pred HHCCCCEEEEEECHHHHH-HHHHHCC------CCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCC---CCCCCCCHH
T ss_conf 986997799992889988-7740015------886789999999999999779828999998433778---997725388
Q ss_pred CCCCCCCCEEEEEEC
Q ss_conf 311111124897504
Q gi|255764460|r 221 NALKFYSSVRLDIRR 235 (363)
Q Consensus 221 ~al~~~aS~rl~i~k 235 (363)
T Consensus 151 ~~l~~~~d~~i~L~r 165 (165)
T cd01120 151 QNLEDIADTVIVLSR 165 (165)
T ss_pred HHHHHHCCEEEEEEC
T ss_conf 888364266999839