HHsearch alignment for GI: 255764460 and conserved domain: cd03218
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=97.03 E-value=0.012 Score=36.32 Aligned_cols=71 Identities=24% Similarity=0.266 Sum_probs=39.8
Q ss_pred CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCC-CCCH-HHHHHHCC--CHHHEEEEECCCHHHHH
Q ss_conf 7268807999706872378999999875200898799997388-5566-88998198--83344897258489999
Q gi|255764460|r 63 GFPKGRIVEIYGPESSGKTTLALHTIAQSQKTGGTCAFVDAEH-ALDS-IYARKLGV--DLKNLLISQPDTGEQAL 134 (363)
Q Consensus 63 G~p~Gri~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~iD~E~-~~~~-~~a~~~Gv--d~~~l~~~~~~~~E~~~ 134 (363)
T Consensus 22 ~v~~Gei~~llGpNGAGKSTll-~~i~Gl~~p~~G~I~~~g~di~~~~~~~r~r~gig~~pQ~~~l~~~ltV~enl 96 (232)
T cd03218 22 SVKQGEIVGLLGPNGAGKTTTF-YMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRKLTVEENI 96 (232)
T ss_pred EECCCCEEEEECCCCCCHHHHH-HHHHCCCCCCCEEEEECCEECCCCCHHHHHHCCEEECCCCCCCCCCCCHHHHH
T ss_conf 9899959999999996199999-99977999986299999999999999999971979877777678888899999