>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.

Probab=97.64 E-value=0.00058 Score=44.64 Aligned_cols=123 Identities=20% Similarity=0.293 Sum_probs=66.0 Q ss_pred CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCC-CEEEEEECCCCC-C-HHHHHHHCCCHHHEEEEECCCHHH------- Q ss_conf 726880799970687237899999987520089-879999738855-6-688998198833448972584899------- Q gi|255764460|r 63 GFPKGRIVEIYGPESSGKTTLALHTIAQSQKTG-GTCAFVDAEHAL-D-SIYARKLGVDLKNLLISQPDTGEQ------- 132 (363) Q Consensus 63 G~p~Gri~ei~G~~~sGKTtlal~~~a~~qk~g-~~~~~iD~E~~~-~-~~~a~~~Gvd~~~l~~~~~~~~E~------- 132 (363) T Consensus 22 ~i~~Gei~gl~G~NGaGKSTLl-~~i~Gl~~p~~G~i-~i~g~~~~~~~~~~~~~ig~v~q~~~l~~~ltv~e~l~LSgG 99 (173) T cd03230 22 TVEKGEIYGLLGPNGAGKTTLI-KIILGLLKPDSGEI-KVLGKDIKKEPEEVKRRIGYLPEEPSLYENLTVRENLKLSGG 99 (173) T ss_pred EECCCCEEEEECCCCCCHHHHH-HHHHCCCCCCCCEE-EECCEECCCCHHHHHCCEEEEECCCCCCCCCCHHHHHHCCHH T ss_conf 8879939999878997999999-99976857787889-999999886848886578999568766712677898633989 Q ss_pred ---HHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC Q ss_conf ---99999999744897689981433322026554345553022478887677677776420178189998634114 Q gi|255764460|r 133 ---ALEITDMLVRSGAVDIIVIDSVAALTPRAEIEGDMGESLPGMQARLMSQALRKLTSSISRSKCILVFINQMRMK 206 (363) Q Consensus 133 ---~~~i~~~li~~~~~~liViDSi~al~p~~Eie~~~~d~~~g~~ar~ms~~lrkl~~~~~k~~~~~i~iNQ~r~~ 206 (363) T Consensus 100 ~kqrv~ia~al~~--~p~lllLDEPt~-----gLD~-------~~~-~~i~~~i~~l----~~~g~tvi~~tH~l~~ 157 (173) T cd03230 100 MKQRLALAQALLH--DPELLILDEPTS-----GLDP-------ESR-REFWELLREL----KKEGKTILLSSHILEE 157 (173) T ss_pred HHHHHHHHHHHHC--CCCEEEECCCCC-----CCCH-------HHH-HHHHHHHHHH----HHCCCEEEEECCCHHH T ss_conf 9999999999964--999999908865-----7999-------999-9999999999----9689999999283899

HHsearch alignment for GI: 255764460 and conserved domain: cd03230