HHsearch alignment for GI: 255764460 and conserved domain: cd03249
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=95.52 E-value=0.021 Score=34.83 Aligned_cols=53 Identities=23% Similarity=0.373 Sum_probs=33.5
Q ss_pred CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECC--CCCCHH-HHHHHC
Q ss_conf 726880799970687237899999987520089879999738--855668-899819
Q gi|255764460|r 63 GFPKGRIVEIYGPESSGKTTLALHTIAQSQKTGGTCAFVDAE--HALDSI-YARKLG 116 (363)
Q Consensus 63 G~p~Gri~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~iD~E--~~~~~~-~a~~~G 116 (363)
T Consensus 25 ~i~~G~~iaIvG~sGsGKSTLl~ll~gl~~p~~G~-I~idg~~i~~~~~~~~r~~i~ 80 (238)
T cd03249 25 TIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGE-ILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCE-EEECCEECCCCCHHHHHHCEE
T ss_conf 97699999999999998999999982386188518-999999923189999974069