HHsearch alignment for GI: 255764460 and conserved domain: cd03255
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=97.54 E-value=0.0022 Score=41.01 Aligned_cols=41 Identities=32% Similarity=0.465 Sum_probs=31.0
Q ss_pred CCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 268807999706872378999999875200898799997388
Q gi|255764460|r 64 FPKGRIVEIYGPESSGKTTLALHTIAQSQKTGGTCAFVDAEH 105 (363)
Q Consensus 64 ~p~Gri~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~iD~E~ 105 (363)
T Consensus 27 i~~Ge~~~iiG~sGsGKTTll-~~i~Gl~~p~~G~I~~~g~~ 67 (218)
T cd03255 27 IEKGEFVAIVGPSGSGKSTLL-NILGGLDRPTSGEVRVDGTD 67 (218)
T ss_pred ECCCCEEEEECCCCCHHHHHH-HHHHCCCCCCCEEEEECCEE
T ss_conf 869989999999998699999-99966999996499999999