HHsearch alignment for GI: 255764460 and conserved domain: cd03264
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=96.88 E-value=0.019 Score=35.03 Aligned_cols=71 Identities=21% Similarity=0.307 Sum_probs=39.7
Q ss_pred CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCC-CH-HHHHHHCCCHHHEEEEECCCHHHHHH
Q ss_conf 726880799970687237899999987520089879999738855-66-88998198833448972584899999
Q gi|255764460|r 63 GFPKGRIVEIYGPESSGKTTLALHTIAQSQKTGGTCAFVDAEHAL-DS-IYARKLGVDLKNLLISQPDTGEQALE 135 (363)
Q Consensus 63 G~p~Gri~ei~G~~~sGKTtlal~~~a~~qk~g~~~~~iD~E~~~-~~-~~a~~~Gvd~~~l~~~~~~~~E~~~~ 135 (363)
T Consensus 22 ~i~~G-i~gllGpNGAGKSTll-~~i~Gl~~p~sG~i~i~g~~~~~~~~~~~~~iG~vpq~~~l~~~ltv~e~l~ 94 (211)
T cd03264 22 TLGPG-MYGLLGPNGAGKTTLM-RILATLTPPSSGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFTVREFLD 94 (211)
T ss_pred EECCC-EEEEECCCCCHHHHHH-HHHHCCCCCCCEEEEECCEECCCCHHHHHHHEEEECCCCCCCCCCCHHHHHH
T ss_conf 88897-5999999982399999-9997596689629999999966188989730799757776898987999999